Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444089 |
| length | 200 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G375001 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 12526620 ~ 12526819 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444050 | lncRNA | downstream | 85081 | 12441321 ~ 12441539 (-) | True | G374963 |
| TU444049 | lncRNA | downstream | 88934 | 12437356 ~ 12437686 (-) | True | G374962 |
| TU444048 | lncRNA | downstream | 89400 | 12436772 ~ 12437220 (-) | True | G374961 |
| TU444014 | lncRNA | downstream | 203045 | 12322964 ~ 12323575 (-) | True | G374935 |
| TU443961 | lncRNA | downstream | 367705 | 12158708 ~ 12158915 (-) | True | G374885 |
| TU444111 | lncRNA | upstream | 33782 | 12560601 ~ 12560825 (-) | True | G375018 |
| TU444126 | lncRNA | upstream | 57626 | 12584445 ~ 12584659 (-) | True | G375027 |
| TU444129 | lncRNA | upstream | 58341 | 12585160 ~ 12585597 (-) | True | G375028 |
| TU444162 | lncRNA | upstream | 98312 | 12625131 ~ 12625619 (-) | False | LOC113537246 |
| TU444203 | lncRNA | upstream | 169196 | 12696015 ~ 12697218 (-) | True | G375097 |
| XM_026932408.2 | mRNA | downstream | 55009 | 12465957 ~ 12471611 (-) | True | inab |
| XM_026932160.2 | mRNA | downstream | 106065 | 12418468 ~ 12420555 (-) | True | lbx1b |
| XM_026932093.2 | mRNA | downstream | 113589 | 12407030 ~ 12413031 (-) | False | cenpk |
| XM_026932092.2 | mRNA | downstream | 113590 | 12407030 ~ 12413030 (-) | True | cenpk |
| XM_026932132.2 | mRNA | downstream | 126854 | 12350188 ~ 12399766 (-) | False | rims1b |
| XM_034299940.1 | mRNA | upstream | 9678 | 12536497 ~ 12546423 (-) | True | as3mt |
| XM_026932391.2 | mRNA | upstream | 36185 | 12563004 ~ 12570298 (-) | False | wbp1lb |
| XM_026932390.2 | mRNA | upstream | 36185 | 12563004 ~ 12570297 (-) | True | wbp1lb |
| XM_026932144.2 | mRNA | upstream | 44220 | 12571039 ~ 12578393 (-) | False | poll |
| XM_026932142.2 | mRNA | upstream | 44220 | 12571039 ~ 12578393 (-) | True | poll |
| trnar-ucu_14 | other | downstream | 1053649 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU442843 | other | downstream | 1654074 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 2607880 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 3919780 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 4094196 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU444510 | other | upstream | 782219 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 797263 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 798698 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 799174 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_18 | other | upstream | 801233 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
