Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444111 |
| length | 225 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G375018 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 12560601 ~ 12560825 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444089 | lncRNA | downstream | 33782 | 12526620 ~ 12526819 (-) | True | G375001 |
| TU444050 | lncRNA | downstream | 119062 | 12441321 ~ 12441539 (-) | True | G374963 |
| TU444049 | lncRNA | downstream | 122915 | 12437356 ~ 12437686 (-) | True | G374962 |
| TU444048 | lncRNA | downstream | 123381 | 12436772 ~ 12437220 (-) | True | G374961 |
| TU444014 | lncRNA | downstream | 237026 | 12322964 ~ 12323575 (-) | True | G374935 |
| TU444126 | lncRNA | upstream | 23620 | 12584445 ~ 12584659 (-) | True | G375027 |
| TU444129 | lncRNA | upstream | 24335 | 12585160 ~ 12585597 (-) | True | G375028 |
| TU444162 | lncRNA | upstream | 64306 | 12625131 ~ 12625619 (-) | False | LOC113537246 |
| TU444203 | lncRNA | upstream | 135190 | 12696015 ~ 12697218 (-) | True | G375097 |
| TU444227 | lncRNA | upstream | 180600 | 12741425 ~ 12741652 (-) | True | G375119 |
| XM_034299940.1 | mRNA | downstream | 14178 | 12536497 ~ 12546423 (-) | True | as3mt |
| XM_026932278.2 | mRNA | downstream | 25370 | 12502681 ~ 12535231 (-) | True | cnnm2b |
| XM_026932279.2 | mRNA | downstream | 25370 | 12502682 ~ 12535231 (-) | False | cnnm2b |
| XM_026932408.2 | mRNA | downstream | 88990 | 12465957 ~ 12471611 (-) | True | inab |
| XM_026932160.2 | mRNA | downstream | 140046 | 12418468 ~ 12420555 (-) | True | lbx1b |
| XM_026932391.2 | mRNA | upstream | 2179 | 12563004 ~ 12570298 (-) | False | wbp1lb |
| XM_026932390.2 | mRNA | upstream | 2179 | 12563004 ~ 12570297 (-) | True | wbp1lb |
| XM_026932144.2 | mRNA | upstream | 10214 | 12571039 ~ 12578393 (-) | False | poll |
| XM_026932142.2 | mRNA | upstream | 10214 | 12571039 ~ 12578393 (-) | True | poll |
| XM_034300265.1 | mRNA | upstream | 24901 | 12585726 ~ 12592448 (-) | True | fgf8b |
| trnar-ucu_14 | other | downstream | 1087630 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU442843 | other | downstream | 1688055 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 2641861 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 3953761 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 4128177 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU444510 | other | upstream | 748213 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 763257 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 764692 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 765168 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_18 | other | upstream | 767227 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
