Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444227 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G375119 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 12741425 ~ 12741652 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444203 | lncRNA | downstream | 44207 | 12696015 ~ 12697218 (-) | True | G375097 |
| TU444162 | lncRNA | downstream | 115806 | 12625131 ~ 12625619 (-) | False | LOC113537246 |
| TU444129 | lncRNA | downstream | 155828 | 12585160 ~ 12585597 (-) | True | G375028 |
| TU444126 | lncRNA | downstream | 156766 | 12584445 ~ 12584659 (-) | True | G375027 |
| TU444111 | lncRNA | downstream | 180600 | 12560601 ~ 12560825 (-) | True | G375018 |
| TU444229 | lncRNA | upstream | 668 | 12742320 ~ 12742520 (-) | True | G375121 |
| TU444257 | lncRNA | upstream | 91224 | 12832876 ~ 12833354 (-) | True | G375141 |
| TU444471 | lncRNA | upstream | 526230 | 13267882 ~ 13271205 (-) | True | G375329 |
| TU444472 | lncRNA | upstream | 526230 | 13267882 ~ 13271621 (-) | False | G375329 |
| XR_003403790.2 | lncRNA | upstream | 645180 | 13386832 ~ 13401425 (-) | True | LOC113537738 |
| XM_034299932.1 | mRNA | downstream | 81932 | 12643943 ~ 12659493 (-) | False | LOC113537226 |
| XM_034299933.1 | mRNA | downstream | 84622 | 12643939 ~ 12656803 (-) | False | LOC113537226 |
| XM_034299931.1 | mRNA | downstream | 84622 | 12643944 ~ 12656803 (-) | True | LOC113537226 |
| XM_034299936.1 | mRNA | downstream | 84622 | 12645632 ~ 12656803 (-) | False | LOC113537226 |
| XM_034299957.1 | mRNA | downstream | 111022 | 12625051 ~ 12630403 (-) | True | LOC113537246 |
| XM_026931696.2 | mRNA | upstream | 2609 | 12744261 ~ 12751839 (-) | True | pnpla4 |
| XM_026931697.2 | mRNA | upstream | 2609 | 12744261 ~ 12751734 (-) | False | pnpla4 |
| XM_026932068.2 | mRNA | upstream | 566061 | 13307713 ~ 13320530 (-) | True | gyg2 |
| XM_034300021.1 | mRNA | upstream | 567770 | 13309422 ~ 13320530 (-) | False | gyg2 |
| XM_034300020.1 | mRNA | upstream | 567770 | 13309422 ~ 13320530 (-) | False | gyg2 |
| trnar-ucu_14 | other | downstream | 1268454 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU442843 | other | downstream | 1868879 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 2822685 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 4134585 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 4309001 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU444510 | other | upstream | 567386 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 582430 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 583865 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 584341 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_18 | other | upstream | 586400 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
