Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU445344 |
| length | 1119 |
| lncRNA type | read_through |
| GC content | 0.46 |
| exon number | 2 |
| gene id | meis1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14460283 ~ 14524516 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445324 | lncRNA | downstream | 4814 | 14383208 ~ 14455469 (-) | True | G376048 |
| TU445329 | lncRNA | downstream | 72408 | 14386338 ~ 14387875 (-) | True | G376050 |
| TU445312 | lncRNA | downstream | 119893 | 14322184 ~ 14340390 (-) | True | G376038 |
| TU445153 | lncRNA | downstream | 185165 | 14274327 ~ 14275118 (-) | False | dand5 |
| TU445072 | lncRNA | downstream | 279669 | 14106222 ~ 14180614 (-) | True | rnf11a |
| TU445374 | lncRNA | upstream | 7864 | 14532367 ~ 14532684 (-) | True | G376093 |
| TU445412 | lncRNA | upstream | 133443 | 14657946 ~ 14661311 (-) | True | G376127 |
| TU445429 | lncRNA | upstream | 157884 | 14682387 ~ 14684328 (-) | True | G376143 |
| TU445465 | lncRNA | upstream | 214866 | 14739369 ~ 14739807 (-) | True | G376171 |
| TU445467 | lncRNA | upstream | 214977 | 14739480 ~ 14739807 (-) | False | G376171 |
| XM_034299883.1 | mRNA | downstream | 29737 | 14411372 ~ 14430546 (-) | True | aplf |
| XM_026931791.2 | mRNA | downstream | 89596 | 14361464 ~ 14370687 (-) | True | ctsh |
| XM_026932150.2 | mRNA | downstream | 107129 | 14345342 ~ 14353154 (-) | False | prdx2 |
| XM_026932149.2 | mRNA | downstream | 107129 | 14345342 ~ 14353154 (-) | True | prdx2 |
| XM_026932339.2 | mRNA | downstream | 183746 | 14274398 ~ 14276537 (-) | True | dand5 |
| XM_026931754.2 | mRNA | upstream | 29988 | 14554491 ~ 14567086 (-) | True | actr2a |
| XM_034299962.1 | mRNA | upstream | 45137 | 14569640 ~ 14579218 (-) | True | atg4da |
| XM_026931702.2 | mRNA | upstream | 45137 | 14569640 ~ 14579217 (-) | False | atg4da |
| XM_034299964.1 | mRNA | upstream | 45137 | 14569640 ~ 14578369 (-) | False | atg4da |
| XM_026931764.2 | mRNA | upstream | 61691 | 14586194 ~ 14641454 (-) | True | mast1a |
| XR_004577346.1 | other | downstream | 185153 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 421297 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 421685 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| XR_003403797.2 | other | downstream | 422421 | 14037731 ~ 14037862 (-) | True | LOC113537775 |
| TU445045 | other | downstream | 429404 | 14027294 ~ 14030879 (-) | True | G375826 |
| TU445430 | other | upstream | 158599 | 14683102 ~ 14684328 (-) | False | G376143 |
| TU445400 | other | upstream | 172736 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU446065 | other | upstream | 931276 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 931276 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 931276 | 15455779 ~ 15457083 (-) | False | dpy30 |
