Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU445374 |
| length | 318 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G376093 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14532367 ~ 14532684 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445344 | lncRNA | downstream | 7864 | 14460283 ~ 14524503 (-) | False | meis1a |
| TU445336 | lncRNA | downstream | 65859 | 14462142 ~ 14466508 (-) | True | G376055 |
| TU445324 | lncRNA | downstream | 76898 | 14383208 ~ 14455469 (-) | True | G376048 |
| TU445329 | lncRNA | downstream | 144492 | 14386338 ~ 14387875 (-) | True | G376050 |
| TU445312 | lncRNA | downstream | 191977 | 14322184 ~ 14340390 (-) | True | G376038 |
| TU445412 | lncRNA | upstream | 125262 | 14657946 ~ 14661311 (-) | True | G376127 |
| TU445429 | lncRNA | upstream | 149703 | 14682387 ~ 14684328 (-) | True | G376143 |
| TU445465 | lncRNA | upstream | 206685 | 14739369 ~ 14739807 (-) | True | G376171 |
| TU445467 | lncRNA | upstream | 206796 | 14739480 ~ 14739807 (-) | False | G376171 |
| TU445468 | lncRNA | upstream | 207577 | 14740261 ~ 14741549 (-) | False | b3gnt2a |
| XM_026932003.2 | mRNA | downstream | 7851 | 14488794 ~ 14524516 (-) | False | meis1a |
| XM_026932002.2 | mRNA | downstream | 7851 | 14488794 ~ 14524516 (-) | True | meis1a |
| XM_026931768.2 | mRNA | downstream | 49503 | 14476538 ~ 14482864 (-) | True | etaa1 |
| XM_026931769.2 | mRNA | downstream | 49503 | 14477085 ~ 14482864 (-) | False | etaa1 |
| XM_034299926.1 | mRNA | downstream | 49710 | 14476538 ~ 14482657 (-) | False | etaa1 |
| XM_026931754.2 | mRNA | upstream | 21807 | 14554491 ~ 14567086 (-) | True | actr2a |
| XM_034299962.1 | mRNA | upstream | 36956 | 14569640 ~ 14579218 (-) | True | atg4da |
| XM_026931702.2 | mRNA | upstream | 36956 | 14569640 ~ 14579217 (-) | False | atg4da |
| XM_034299964.1 | mRNA | upstream | 36956 | 14569640 ~ 14578369 (-) | False | atg4da |
| XM_026931764.2 | mRNA | upstream | 53510 | 14586194 ~ 14641454 (-) | True | mast1a |
| XR_004577346.1 | other | downstream | 257237 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 493381 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 493769 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| XR_003403797.2 | other | downstream | 494505 | 14037731 ~ 14037862 (-) | True | LOC113537775 |
| TU445045 | other | downstream | 501488 | 14027294 ~ 14030879 (-) | True | G375826 |
| TU445430 | other | upstream | 150418 | 14683102 ~ 14684328 (-) | False | G376143 |
| TU445400 | other | upstream | 164555 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU446065 | other | upstream | 923095 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 923095 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 923095 | 15455779 ~ 15457083 (-) | False | dpy30 |
