Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU445465 |
| length | 439 |
| lncRNA type | inter_gene |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G376171 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14739369 ~ 14739807 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445429 | lncRNA | downstream | 55041 | 14682387 ~ 14684328 (-) | True | G376143 |
| TU445412 | lncRNA | downstream | 78058 | 14657946 ~ 14661311 (-) | True | G376127 |
| TU445374 | lncRNA | downstream | 206685 | 14532367 ~ 14532684 (-) | True | G376093 |
| TU445344 | lncRNA | downstream | 214866 | 14460283 ~ 14524503 (-) | False | meis1a |
| TU445336 | lncRNA | downstream | 272861 | 14462142 ~ 14466508 (-) | True | G376055 |
| TU445468 | lncRNA | upstream | 454 | 14740261 ~ 14741549 (-) | False | b3gnt2a |
| TU445642 | lncRNA | upstream | 170960 | 14910767 ~ 14961052 (-) | False | akt3b |
| TU445691 | lncRNA | upstream | 295358 | 15035165 ~ 15035466 (-) | True | G376364 |
| TU445961 | lncRNA | upstream | 304905 | 15044712 ~ 15045359 (-) | True | G376574 |
| TU445990 | lncRNA | upstream | 359209 | 15099016 ~ 15101012 (-) | True | G376602 |
| XM_034300025.1 | mRNA | downstream | 1509 | 14732575 ~ 14737860 (-) | True | zgc:66455 |
| XM_026932118.2 | mRNA | downstream | 1510 | 14732575 ~ 14737859 (-) | False | zgc:66455 |
| XM_026932028.2 | mRNA | downstream | 26723 | 14697274 ~ 14712646 (-) | True | ifngr1 |
| XM_026931764.2 | mRNA | downstream | 97915 | 14586194 ~ 14641454 (-) | True | mast1a |
| XM_034299962.1 | mRNA | downstream | 160151 | 14569640 ~ 14579218 (-) | True | atg4da |
| XM_026931643.2 | mRNA | upstream | 325 | 14740132 ~ 14749734 (-) | True | b3gnt2a |
| XM_026932393.2 | mRNA | upstream | 11223 | 14751030 ~ 14760038 (-) | True | commd1 |
| XM_034299884.1 | mRNA | upstream | 47312 | 14787119 ~ 14851953 (-) | True | usp34 |
| XM_034300307.1 | mRNA | upstream | 115074 | 14854881 ~ 14874665 (-) | True | xpo1a |
| XM_034300308.1 | mRNA | upstream | 115765 | 14855572 ~ 14878584 (-) | False | xpo1a |
| TU445400 | other | downstream | 26992 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU445430 | other | downstream | 55041 | 14683102 ~ 14684328 (-) | False | G376143 |
| XR_004577346.1 | other | downstream | 464239 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 700383 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 700771 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| TU446065 | other | upstream | 715972 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 715972 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 715972 | 15455779 ~ 15457083 (-) | False | dpy30 |
| TU446479 | other | upstream | 1177821 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446429 | other | upstream | 1193830 | 15933637 ~ 15942686 (-) | False | khsrp |
