Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU445691 |
| length | 302 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G376364 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 15035165 ~ 15035466 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445642 | lncRNA | downstream | 74113 | 14910767 ~ 14961052 (-) | False | akt3b |
| TU445468 | lncRNA | downstream | 293616 | 14740261 ~ 14741549 (-) | False | b3gnt2a |
| TU445465 | lncRNA | downstream | 295358 | 14739369 ~ 14739807 (-) | True | G376171 |
| TU445467 | lncRNA | downstream | 295358 | 14739480 ~ 14739807 (-) | False | G376171 |
| TU445429 | lncRNA | downstream | 350837 | 14682387 ~ 14684328 (-) | True | G376143 |
| TU445961 | lncRNA | upstream | 9246 | 15044712 ~ 15045359 (-) | True | G376574 |
| TU445990 | lncRNA | upstream | 63550 | 15099016 ~ 15101012 (-) | True | G376602 |
| TU445995 | lncRNA | upstream | 82046 | 15117512 ~ 15117893 (-) | False | triobpa |
| TU446002 | lncRNA | upstream | 96551 | 15132017 ~ 15132290 (-) | True | G376608 |
| TU446008 | lncRNA | upstream | 112319 | 15147785 ~ 15147985 (-) | True | G376613 |
| XM_034300028.1 | mRNA | downstream | 76964 | 14953561 ~ 14958201 (-) | False | LOC113537617 |
| XM_034300027.1 | mRNA | downstream | 76968 | 14953561 ~ 14958197 (-) | False | LOC113537617 |
| XM_034300026.1 | mRNA | downstream | 76968 | 14953561 ~ 14958197 (-) | True | LOC113537617 |
| XM_034299873.1 | mRNA | downstream | 100662 | 14910662 ~ 14934503 (-) | False | akt3b |
| XM_034299872.1 | mRNA | downstream | 100662 | 14910662 ~ 14934503 (-) | False | akt3b |
| XM_026932137.2 | mRNA | upstream | 25455 | 15060921 ~ 15072345 (-) | True | spast |
| XM_026932138.2 | mRNA | upstream | 25455 | 15060921 ~ 15072344 (-) | False | spast |
| XM_026932164.2 | mRNA | upstream | 39205 | 15074671 ~ 15077616 (-) | True | rln3b |
| XM_034300392.1 | mRNA | upstream | 68711 | 15104177 ~ 15113293 (-) | True | dcaf15 |
| XM_034300393.1 | mRNA | upstream | 68711 | 15104177 ~ 15113156 (-) | False | dcaf15 |
| TU445400 | other | downstream | 322788 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU445430 | other | downstream | 350837 | 14683102 ~ 14684328 (-) | False | G376143 |
| XR_004577346.1 | other | downstream | 760035 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 996179 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 996567 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| TU446065 | other | upstream | 420313 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 420313 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 420313 | 15455779 ~ 15457083 (-) | False | dpy30 |
| TU446479 | other | upstream | 882162 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446429 | other | upstream | 898171 | 15933637 ~ 15942686 (-) | False | khsrp |
