Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU446070 |
| length | 387 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 3 |
| gene id | G376670 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 15461134 ~ 15462622 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU446085 | lncRNA | downstream | 7342 | 15412424 ~ 15453792 (-) | False | dpy30 |
| TU446084 | lncRNA | downstream | 7342 | 15450312 ~ 15453792 (-) | True | dpy30 |
| TU446071 | lncRNA | downstream | 59864 | 15397668 ~ 15401270 (-) | True | G376671 |
| XR_004577285.1 | lncRNA | downstream | 302488 | 15158146 ~ 15158646 (-) | True | LOC117596121 |
| TU446010 | lncRNA | downstream | 308014 | 15152892 ~ 15153120 (-) | True | G376615 |
| TU446162 | lncRNA | upstream | 85770 | 15548392 ~ 15549785 (-) | True | G376755 |
| TU446167 | lncRNA | upstream | 149000 | 15611622 ~ 15653021 (-) | True | G376758 |
| TU446181 | lncRNA | upstream | 212185 | 15674807 ~ 15679171 (-) | True | G376763 |
| TU446210 | lncRNA | upstream | 218539 | 15681161 ~ 15683090 (-) | True | G376786 |
| TU446236 | lncRNA | upstream | 253570 | 15716192 ~ 15716946 (-) | True | G376807 |
| XM_034300210.1 | mRNA | downstream | 4747 | 15453138 ~ 15456387 (-) | False | dpy30 |
| XM_034300014.1 | mRNA | downstream | 24874 | 15425244 ~ 15436260 (-) | False | srd5a2a |
| XM_026931808.2 | mRNA | downstream | 24880 | 15425244 ~ 15436254 (-) | True | srd5a2a |
| XM_026932211.2 | mRNA | downstream | 169772 | 15287451 ~ 15291362 (-) | False | btbd3a |
| XM_026932213.2 | mRNA | downstream | 171447 | 15286110 ~ 15289687 (-) | True | btbd3a |
| XM_034300211.1 | mRNA | upstream | 19912 | 15482534 ~ 15494984 (-) | True | LOC113537512 |
| XM_026931717.2 | mRNA | upstream | 35317 | 15497939 ~ 15501527 (-) | False | nthl1 |
| XM_026931716.2 | mRNA | upstream | 35317 | 15497939 ~ 15501526 (-) | True | nthl1 |
| XM_034300376.1 | mRNA | upstream | 88304 | 15550926 ~ 15634446 (-) | False | pkd1a |
| XM_034300375.1 | mRNA | upstream | 88304 | 15550926 ~ 15634446 (-) | True | pkd1a |
| TU446066 | other | downstream | 2929 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | downstream | 4051 | 15455779 ~ 15457083 (-) | False | dpy30 |
| TU446065 | other | downstream | 4107 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU445400 | other | downstream | 748757 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU445430 | other | downstream | 776806 | 14683102 ~ 14684328 (-) | False | G376143 |
| TU446479 | other | upstream | 455006 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446429 | other | upstream | 471015 | 15933637 ~ 15942686 (-) | False | khsrp |
| TU446671 | other | upstream | 690297 | 16152919 ~ 16155481 (-) | False | zgc:158803 |
| TU446672 | other | upstream | 692986 | 16155608 ~ 16164370 (-) | False | zgc:158803 |
| XR_004577334.1 | other | upstream | 962832 | 16425454 ~ 16475431 (-) | False | LOC113537389 |
