Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU446816 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G377172 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 16350249 ~ 16350459 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU446815 | lncRNA | downstream | 189 | 16349377 ~ 16350060 (-) | True | G377171 |
| TU446750 | lncRNA | downstream | 84602 | 16263903 ~ 16265647 (-) | True | G377125 |
| TU446673 | lncRNA | downstream | 128642 | 16216804 ~ 16221607 (-) | False | si:ch211-286b5.5 |
| TU446675 | lncRNA | downstream | 171127 | 16178610 ~ 16179122 (-) | True | G377084 |
| TU446676 | lncRNA | downstream | 171127 | 16178662 ~ 16179122 (-) | False | G377084 |
| TU446851 | lncRNA | upstream | 38635 | 16389094 ~ 16390803 (-) | True | G377191 |
| TU446915 | lncRNA | upstream | 137331 | 16487790 ~ 16488131 (-) | True | G377244 |
| TU447063 | lncRNA | upstream | 228783 | 16579242 ~ 16581242 (-) | False | si:dkey-76b14.2 |
| XR_004577292.1 | lncRNA | upstream | 248454 | 16598913 ~ 16600222 (-) | True | LOC113547464 |
| TU447074 | lncRNA | upstream | 255871 | 16606330 ~ 16607547 (-) | True | G377359 |
| XM_026931890.2 | mRNA | downstream | 1792 | 16341237 ~ 16348457 (-) | True | dnajb1b |
| XM_026931865.2 | mRNA | downstream | 103958 | 16238209 ~ 16246291 (-) | True | LOC113537406 |
| XM_034300047.1 | mRNA | downstream | 114102 | 16224807 ~ 16236147 (-) | True | LOC113537690 |
| XM_026931919.2 | mRNA | upstream | 18039 | 16368498 ~ 16373207 (-) | True | ndufb7 |
| XM_026931857.2 | mRNA | upstream | 28847 | 16379306 ~ 16388207 (-) | True | samd1b |
| XM_026931886.2 | mRNA | upstream | 48460 | 16398919 ~ 16411731 (-) | True | prkacab |
| XM_034299953.1 | mRNA | upstream | 63490 | 16413949 ~ 16418007 (-) | True | asf1bb |
| XM_034300234.1 | mRNA | upstream | 70802 | 16421261 ~ 16475431 (-) | True | LOC113537389 |
| TU446672 | other | downstream | 185879 | 16155608 ~ 16164370 (-) | False | zgc:158803 |
| TU446671 | other | downstream | 194768 | 16152919 ~ 16155481 (-) | False | zgc:158803 |
| TU446429 | other | downstream | 407563 | 15933637 ~ 15942686 (-) | False | khsrp |
| TU446479 | other | downstream | 429696 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446067 | other | downstream | 893166 | 15455779 ~ 15457083 (-) | False | dpy30 |
| XR_004577334.1 | other | upstream | 74995 | 16425454 ~ 16475431 (-) | False | LOC113537389 |
| TU447143 | other | upstream | 494553 | 16845012 ~ 16851663 (-) | True | G377416 |
| TU447144 | other | upstream | 494553 | 16845012 ~ 16845602 (-) | False | G377416 |
| TU447682 | other | upstream | 832273 | 17182732 ~ 17194992 (-) | False | LOC113525650 |
| TU447735 | other | upstream | 915770 | 17266229 ~ 17268030 (-) | True | G377862 |
