Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU447063 |
| length | 205 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 3 |
| gene id | si:dkey-76b14.2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 16566253 ~ 16583137 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU446915 | lncRNA | downstream | 91111 | 16487790 ~ 16488131 (-) | True | G377244 |
| TU446851 | lncRNA | downstream | 188439 | 16389094 ~ 16390803 (-) | True | G377191 |
| TU446816 | lncRNA | downstream | 228783 | 16350249 ~ 16350459 (-) | True | G377172 |
| TU446815 | lncRNA | downstream | 229182 | 16349377 ~ 16350060 (-) | True | G377171 |
| TU446750 | lncRNA | downstream | 313595 | 16263903 ~ 16265647 (-) | True | G377125 |
| XR_004577292.1 | lncRNA | upstream | 17671 | 16598913 ~ 16600222 (-) | True | LOC113547464 |
| TU447074 | lncRNA | upstream | 25088 | 16606330 ~ 16607547 (-) | True | G377359 |
| TU447084 | lncRNA | upstream | 39925 | 16621167 ~ 16741989 (-) | False | slc25a10 |
| TU447085 | lncRNA | upstream | 63854 | 16645096 ~ 16686484 (-) | False | slc25a10 |
| TU447151 | lncRNA | upstream | 275537 | 16856779 ~ 16858709 (-) | True | G377422 |
| XM_034300088.1 | mRNA | downstream | 20082 | 16533834 ~ 16559160 (-) | True | LOC117595682 |
| XM_034300087.1 | mRNA | downstream | 53836 | 16497785 ~ 16525406 (-) | True | LOC113537390 |
| XM_034300234.1 | mRNA | downstream | 103811 | 16421261 ~ 16475431 (-) | True | LOC113537389 |
| XM_034299953.1 | mRNA | downstream | 161235 | 16413949 ~ 16418007 (-) | True | asf1bb |
| XM_026931886.2 | mRNA | downstream | 167511 | 16398919 ~ 16411731 (-) | True | prkacab |
| XM_026931872.2 | mRNA | upstream | 2137 | 16583379 ~ 16589630 (-) | True | zgc:65894 |
| XM_026931861.2 | mRNA | upstream | 49382 | 16630624 ~ 16663097 (-) | False | gcgrb |
| XM_026931862.2 | mRNA | upstream | 49382 | 16630624 ~ 16663097 (-) | False | gcgrb |
| XM_026931860.2 | mRNA | upstream | 49382 | 16630624 ~ 16663097 (-) | True | gcgrb |
| XM_034300235.1 | mRNA | upstream | 99251 | 16680493 ~ 16695687 (-) | True | slc25a10 |
| XR_004577334.1 | other | downstream | 103811 | 16425454 ~ 16475431 (-) | False | LOC113537389 |
| TU446672 | other | downstream | 414872 | 16155608 ~ 16164370 (-) | False | zgc:158803 |
| TU446671 | other | downstream | 423761 | 16152919 ~ 16155481 (-) | False | zgc:158803 |
| TU446429 | other | downstream | 636556 | 15933637 ~ 15942686 (-) | False | khsrp |
| TU446479 | other | downstream | 658689 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU447143 | other | upstream | 263770 | 16845012 ~ 16851663 (-) | True | G377416 |
| TU447144 | other | upstream | 263770 | 16845012 ~ 16845602 (-) | False | G377416 |
| TU447682 | other | upstream | 601490 | 17182732 ~ 17194992 (-) | False | LOC113525650 |
| TU447735 | other | upstream | 684987 | 17266229 ~ 17268030 (-) | True | G377862 |
| TU447860 | other | upstream | 1126758 | 17708000 ~ 17712592 (-) | False | ubl5 |
