Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU447707 |
| length | 861 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G377847 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 17241835 ~ 17253715 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577336.1 | lncRNA | downstream | 163674 | 17068536 ~ 17078161 (-) | True | LOC117596165 |
| TU447211 | lncRNA | downstream | 189570 | 17032903 ~ 17052265 (-) | True | G377474 |
| TU447172 | lncRNA | downstream | 246186 | 16995398 ~ 16995649 (-) | True | G377441 |
| TU447151 | lncRNA | downstream | 383126 | 16856779 ~ 16858709 (-) | True | G377422 |
| TU447084 | lncRNA | downstream | 499846 | 16621167 ~ 16741989 (-) | False | slc25a10 |
| TU447754 | lncRNA | upstream | 62836 | 17316551 ~ 17316980 (-) | True | G377874 |
| TU447757 | lncRNA | upstream | 66936 | 17320651 ~ 17337648 (-) | True | G377877 |
| TU447766 | lncRNA | upstream | 84572 | 17338287 ~ 17338671 (-) | False | LOC113526761 |
| TU447776 | lncRNA | upstream | 127466 | 17381181 ~ 17381602 (-) | True | G377892 |
| TU447801 | lncRNA | upstream | 215240 | 17468955 ~ 17560120 (-) | True | G377916 |
| XM_034300315.1 | mRNA | downstream | 19271 | 17215246 ~ 17222564 (-) | True | LOC113525654 |
| XM_034300312.1 | mRNA | downstream | 28082 | 17186588 ~ 17213753 (-) | False | LOC113525651 |
| XM_034300313.1 | mRNA | downstream | 28082 | 17206715 ~ 17213753 (-) | False | LOC113525651 |
| XM_034300310.1 | mRNA | downstream | 38263 | 17186588 ~ 17203572 (-) | True | LOC113525651 |
| XM_034300311.1 | mRNA | downstream | 38263 | 17186588 ~ 17203572 (-) | False | LOC113525651 |
| XM_026914396.2 | mRNA | upstream | 20727 | 17274442 ~ 17279093 (-) | True | nxnl1 |
| XM_026914397.2 | mRNA | upstream | 20727 | 17274442 ~ 17275757 (-) | False | nxnl1 |
| XM_026914469.2 | mRNA | upstream | 27849 | 17281564 ~ 17298227 (-) | True | colgalt1b |
| XM_034300112.1 | mRNA | upstream | 27849 | 17281564 ~ 17298226 (-) | False | colgalt1b |
| XM_034300125.1 | mRNA | upstream | 63987 | 17317702 ~ 17322146 (-) | True | LOC117596143 |
| TU447682 | other | downstream | 46843 | 17182732 ~ 17194992 (-) | False | LOC113525650 |
| TU447143 | other | downstream | 390172 | 16845012 ~ 16851663 (-) | True | G377416 |
| TU447144 | other | downstream | 396233 | 16845012 ~ 16845602 (-) | False | G377416 |
| XR_004577334.1 | other | downstream | 766404 | 16425454 ~ 16475431 (-) | False | LOC113537389 |
| TU446672 | other | downstream | 1077465 | 16155608 ~ 16164370 (-) | False | zgc:158803 |
| TU447735 | other | upstream | 12514 | 17266229 ~ 17268030 (-) | True | G377862 |
| TU447860 | other | upstream | 454285 | 17708000 ~ 17712592 (-) | False | ubl5 |
| TU447895 | other | upstream | 549545 | 17803260 ~ 17814445 (-) | True | G377994 |
| XR_004577358.1 | other | upstream | 909831 | 18163546 ~ 18166960 (-) | False | LOC113524896 |
| TU448228 | other | upstream | 1109728 | 18363443 ~ 18365921 (-) | False | gpank1 |
