Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU448190 |
| length | 420 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G378206 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 18639201 ~ 18639825 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU448187 | lncRNA | upstream | 7619 | 18628478 ~ 18631582 (+) | True | G378203 |
| TU448142 | lncRNA | upstream | 87329 | 18550863 ~ 18551872 (+) | True | G378166 |
| TU448134 | lncRNA | upstream | 102868 | 18535651 ~ 18536333 (+) | True | G378163 |
| TU448110 | lncRNA | upstream | 179735 | 18403834 ~ 18459466 (+) | True | G378151 |
| TU448108 | lncRNA | upstream | 234548 | 18403834 ~ 18404653 (+) | False | G378151 |
| TU448335 | lncRNA | downstream | 69464 | 18709289 ~ 18709713 (+) | True | G378296 |
| TU448350 | lncRNA | downstream | 154270 | 18794095 ~ 18827675 (+) | True | G378306 |
| TU448352 | lncRNA | downstream | 159949 | 18799774 ~ 18834222 (+) | False | G378308 |
| TU448353 | lncRNA | downstream | 162941 | 18802766 ~ 18803611 (+) | True | G378308 |
| TU448351 | lncRNA | downstream | 164787 | 18804612 ~ 18805264 (+) | True | G378307 |
| XM_034300236.1 | mRNA | upstream | 30324 | 18602567 ~ 18608877 (+) | False | cdc37 |
| XM_034300412.1 | mRNA | upstream | 111605 | 18523161 ~ 18527596 (+) | True | LOC117596189 |
| XM_034300406.1 | mRNA | upstream | 134461 | 18498988 ~ 18504740 (+) | True | LOC113524839 |
| XM_034300415.1 | mRNA | upstream | 248551 | 18386005 ~ 18390650 (+) | False | LOC117596190 |
| XM_026911214.2 | mRNA | downstream | 24262 | 18664087 ~ 18674601 (+) | True | sp6 |
| XM_034300150.1 | mRNA | downstream | 141361 | 18781186 ~ 18804485 (+) | True | LOC113525834 |
| XM_034300153.1 | mRNA | downstream | 306257 | 18946082 ~ 19021923 (+) | True | LOC113529661 |
| XM_034300335.1 | mRNA | downstream | 394686 | 19034511 ~ 19105679 (+) | True | LOC113524847 |
| XM_034300336.1 | mRNA | downstream | 394686 | 19034511 ~ 19105679 (+) | False | LOC113524847 |
| XR_004577335.1 | other | upstream | 29217 | 18602567 ~ 18609984 (+) | True | cdc37 |
| TU448141 | other | upstream | 90449 | 18543671 ~ 18548752 (+) | False | txndc11 |
| TU448127 | other | upstream | 143158 | 18494840 ~ 18496043 (+) | True | G378160 |
| TU448033 | other | upstream | 351891 | 18282994 ~ 18287310 (+) | True | G378105 |
| trnak-uuu_20 | other | upstream | 519464 | 18119665 ~ 18119737 (+) | True | trnak-uuu_20 |
| TU448343 | other | downstream | 141213 | 18781038 ~ 18822056 (+) | False | LOC113525834 |
| TU448412 | other | downstream | 297675 | 18937500 ~ 18942328 (+) | True | G378354 |
| TU448413 | other | downstream | 299049 | 18938874 ~ 18942328 (+) | False | G378354 |
| TU448417 | other | downstream | 306290 | 18946115 ~ 18966157 (+) | False | LOC113529661 |
| TU448438 | other | downstream | 499980 | 19139805 ~ 19142137 (+) | True | G378376 |
