Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026931808.2 |
| length | 1324 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | srd5a2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 15425244 ~ 15436260 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008202 | steroid metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003865 | 3-oxo-5-alpha-steroid 4-dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K12344 | SRD5A2; 3-oxo-5-alpha-steroid 4-dehydrogenase 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU446071 | lncRNA | downstream | 23974 | 15397668 ~ 15401270 (-) | True | G376671 |
| XR_004577285.1 | lncRNA | downstream | 266598 | 15158146 ~ 15158646 (-) | True | LOC117596121 |
| TU446010 | lncRNA | downstream | 272124 | 15152892 ~ 15153120 (-) | True | G376615 |
| TU446008 | lncRNA | downstream | 277259 | 15147785 ~ 15147985 (-) | True | G376613 |
| TU446002 | lncRNA | downstream | 292954 | 15132017 ~ 15132290 (-) | True | G376608 |
| TU446084 | lncRNA | upstream | 14058 | 15450312 ~ 15453792 (-) | True | dpy30 |
| TU446070 | lncRNA | upstream | 24880 | 15461134 ~ 15462622 (-) | True | G376670 |
| TU446162 | lncRNA | upstream | 112138 | 15548392 ~ 15549785 (-) | True | G376755 |
| TU446167 | lncRNA | upstream | 175368 | 15611622 ~ 15653021 (-) | True | G376758 |
| TU446181 | lncRNA | upstream | 238553 | 15674807 ~ 15679171 (-) | True | G376763 |
| XM_026932211.2 | mRNA | downstream | 133882 | 15287451 ~ 15291362 (-) | False | btbd3a |
| XM_026932213.2 | mRNA | downstream | 135557 | 15286110 ~ 15289687 (-) | True | btbd3a |
| XM_026931641.2 | mRNA | downstream | 152410 | 15262046 ~ 15272834 (-) | False | LOC113537242 |
| XM_026931642.2 | mRNA | downstream | 153209 | 15262046 ~ 15272035 (-) | True | LOC113537242 |
| XM_034300037.1 | mRNA | downstream | 166950 | 15250611 ~ 15258294 (-) | True | LOC113537336 |
| XM_034300210.1 | mRNA | upstream | 16884 | 15453138 ~ 15456387 (-) | False | dpy30 |
| XM_034300211.1 | mRNA | upstream | 46280 | 15482534 ~ 15494984 (-) | True | LOC113537512 |
| XM_026931717.2 | mRNA | upstream | 61685 | 15497939 ~ 15501527 (-) | False | nthl1 |
| XM_026931716.2 | mRNA | upstream | 61685 | 15497939 ~ 15501526 (-) | True | nthl1 |
| XM_034300376.1 | mRNA | upstream | 114672 | 15550926 ~ 15634446 (-) | False | pkd1a |
| TU445400 | other | downstream | 712867 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU445430 | other | downstream | 740916 | 14683102 ~ 14684328 (-) | False | G376143 |
| XR_004577346.1 | other | downstream | 1150114 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 1386258 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 1386646 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| TU446065 | other | upstream | 19525 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 19525 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 19525 | 15455779 ~ 15457083 (-) | False | dpy30 |
| TU446479 | other | upstream | 481374 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446429 | other | upstream | 497383 | 15933637 ~ 15942686 (-) | False | khsrp |
