Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034300171.1 |
| length | 1348 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 12 |
| gene id | ndufaf5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 15236860 ~ 15243012 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0032259 | methylation | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0008168 | methyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577285.1 | lncRNA | downstream | 78214 | 15158146 ~ 15158646 (-) | True | LOC117596121 |
| TU446010 | lncRNA | downstream | 83740 | 15152892 ~ 15153120 (-) | True | G376615 |
| TU446008 | lncRNA | downstream | 88875 | 15147785 ~ 15147985 (-) | True | G376613 |
| TU446002 | lncRNA | downstream | 104570 | 15132017 ~ 15132290 (-) | True | G376608 |
| TU445995 | lncRNA | downstream | 118967 | 15117512 ~ 15117893 (-) | False | triobpa |
| TU446071 | lncRNA | upstream | 154667 | 15397668 ~ 15401270 (-) | True | G376671 |
| TU446085 | lncRNA | upstream | 169423 | 15412424 ~ 15453792 (-) | False | dpy30 |
| TU446084 | lncRNA | upstream | 207311 | 15450312 ~ 15453792 (-) | True | dpy30 |
| TU446070 | lncRNA | upstream | 218133 | 15461134 ~ 15462622 (-) | True | G376670 |
| TU446162 | lncRNA | upstream | 305391 | 15548392 ~ 15549785 (-) | True | G376755 |
| XM_026932290.2 | mRNA | downstream | 28720 | 15191305 ~ 15208140 (-) | True | nup133 |
| XM_026931794.2 | mRNA | downstream | 50788 | 15181633 ~ 15186072 (-) | True | acta1a |
| XM_026932275.2 | mRNA | downstream | 56032 | 15172738 ~ 15180828 (-) | True | ccsapa |
| XM_026932052.2 | mRNA | downstream | 94059 | 15136233 ~ 15142801 (-) | True | dla |
| XM_034299886.1 | mRNA | downstream | 107604 | 15117733 ~ 15129256 (-) | True | triobpa |
| XM_034300037.1 | mRNA | upstream | 7610 | 15250611 ~ 15258294 (-) | True | LOC113537336 |
| XM_026931641.2 | mRNA | upstream | 19045 | 15262046 ~ 15272834 (-) | False | LOC113537242 |
| XM_026931642.2 | mRNA | upstream | 19045 | 15262046 ~ 15272035 (-) | True | LOC113537242 |
| XM_026932213.2 | mRNA | upstream | 43109 | 15286110 ~ 15289687 (-) | True | btbd3a |
| XM_026932211.2 | mRNA | upstream | 44450 | 15287451 ~ 15291362 (-) | False | btbd3a |
| TU445400 | other | downstream | 524483 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU445430 | other | downstream | 552532 | 14683102 ~ 14684328 (-) | False | G376143 |
| XR_004577346.1 | other | downstream | 961730 | 14274817 ~ 14275130 (-) | False | dand5 |
| XR_003403798.1 | other | downstream | 1197874 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
| XR_003403796.1 | other | downstream | 1198262 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| TU446065 | other | upstream | 212778 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 212778 | 15455779 ~ 15458205 (-) | False | dpy30 |
| TU446067 | other | upstream | 212778 | 15455779 ~ 15457083 (-) | False | dpy30 |
| TU446479 | other | upstream | 674627 | 15917628 ~ 15920553 (-) | True | G376956 |
| TU446429 | other | upstream | 690636 | 15933637 ~ 15942686 (-) | False | khsrp |
