Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026931827.2 |
| length | 1077 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | n6amt1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 5589772 ~ 5596095 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006479 | protein methylation | biological_process |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0008276 | protein methyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577342.1 | lncRNA | downstream | 71392 | 5510716 ~ 5518380 (-) | True | LOC117596170 |
| TU439411 | lncRNA | downstream | 81403 | 5508102 ~ 5508369 (-) | True | G370942 |
| TU439410 | lncRNA | downstream | 83455 | 5506112 ~ 5506317 (-) | True | G370941 |
| XR_003403776.2 | lncRNA | downstream | 160340 | 5415626 ~ 5429432 (-) | False | LOC113537576 |
| TU439645 | lncRNA | upstream | 284381 | 5880476 ~ 5885612 (-) | True | G371117 |
| XR_004577356.1 | lncRNA | upstream | 290751 | 5886846 ~ 5891797 (-) | True | LOC117596178 |
| TU439651 | lncRNA | upstream | 296231 | 5892326 ~ 5895688 (-) | True | G371121 |
| TU439680 | lncRNA | upstream | 397394 | 5993489 ~ 5994747 (-) | True | G371147 |
| TU439686 | lncRNA | upstream | 401908 | 5998003 ~ 5998159 (-) | True | G371152 |
| XM_034300024.1 | mRNA | downstream | 32682 | 5549553 ~ 5557090 (-) | True | wu:fa56d06 |
| XM_034300297.1 | mRNA | downstream | 42740 | 5535285 ~ 5547032 (-) | False | LOC113537235 |
| XM_026931629.2 | mRNA | downstream | 42740 | 5535285 ~ 5547032 (-) | False | LOC113537235 |
| XM_026931628.2 | mRNA | downstream | 42740 | 5535285 ~ 5547032 (-) | True | LOC113537235 |
| XM_026931627.2 | mRNA | downstream | 42741 | 5529992 ~ 5547031 (-) | False | LOC113537235 |
| XM_026931654.2 | mRNA | upstream | 300241 | 5896336 ~ 5908867 (-) | False | jam2a |
| XM_026931653.2 | mRNA | upstream | 300241 | 5896336 ~ 5908867 (-) | True | jam2a |
| XM_026931713.2 | mRNA | upstream | 317864 | 5913959 ~ 5920199 (-) | True | mrpl39 |
| XM_026932220.2 | mRNA | upstream | 345944 | 5942039 ~ 5952313 (-) | False | LOC113537623 |
| XM_034300324.1 | mRNA | upstream | 345944 | 5942039 ~ 5952113 (-) | True | LOC113537623 |
| XR_003403738.2 | other | downstream | 42740 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403780.2 | other | upstream | 346334 | 5942429 ~ 5952313 (-) | False | LOC113537623 |
| XR_004577328.1 | other | upstream | 423592 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_004577329.1 | other | upstream | 762544 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| XR_004577289.1 | other | upstream | 1462740 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| TU440391 | other | upstream | 1462740 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
