RNA id: XM_026931863.2


Basic Information

Item Value
RNA id XM_026931863.2
length 2990
RNA type mRNA
GC content 0.48
exon number 10
gene id slc25a23a
representative True

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 15945851 ~ 15955280 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

AGTCGCCCCGAGGTCAGCTTTACTGggatcattattatttttattttttttctggaggtGTGCACGCGAGCGCGCCGATGTTTTTTCCACTGATAAAGTAAACCGAAGCGGACGGTGGTGCAGGGACGCCGCGCGCACATGGCCGAGCCGCGGAGGCCCGGTACCgggtggtgctggtggtggtcGCGTGCCCGGTGCCAGGAGAATGGACCCGAACCGGAAACGGACCCGGAGCGCGAGCGGCTCTGGACTGAGATCTTCGACCAGCTCGACACCAACAGAGACGGACGGATCGACATTAACGAGCTCGGGGCGGGGCTGGCGGCGCGGGGGCTGCTCTCGCGCACATCGGTGGAGAAGCAGCTTGTGAGAGAAGGAGACACTAATCAGGATGGACAGCTGGACTTTGAGGAGTTCACACATTACCTGCGCACACACGAGAAGCGTCTCCGCCTCATGTTCAGCAGCCTGGATCGCAATAACGACGgtgAGATCGATGCTGGAGAGATCCAGCTCTCGTTACACAGTGTGGGAGTGGAGGTTACGCTAGACGAGGCAAACAAGATcctgcagagTATGGACAAGGACGGCACTATGACCATCGACTGGGTAGAGTGGCGTGACCATTTCCTGTTTAACCCTCTGCACAGCGTGGAGGACATCGCCCTCTACTGGAAACGCTCTGTgatcctGGATATCGGGGAGCTCCTGACAGTTCCTGACGAGTTCTCGGAGAAGGAGAGGAAGTCGGGGTTTGTGTGGAGGCAGCTGATGGCAGGTGCCATGGCGGGAACCGTCTCCAGGACGGGAACGGCTCCTCTCGACCGACTCAAAGTCTTCCTGCAGgttcaTGGTCAGAGCTTGGATAAGGGCAGTGTGTGGAAGGGGCTGAGGATGATGGTGAAGGAAGGTGGGCTCAGAGCTCTGTGGAGAGGAAACGGCATCAATGTGCTCAAAATCGCCCCAGAAACAGCCATCAAGTTCCTCGCTTATGAACAGATAAAGCAGCTGATTCACGGCAGTAAAGACGGAGGAAGTCTGAAGGTTCAGGAGAGATTCCTTGCTGGATCATTAGCAGGAGCCACAGCACAGACCATCATTTACCCCATggagGTGCTGAAGACGCGTCTGACCCTGCGTAAGACCGGGCAGTACTCGGGCGTGCTGGACTGCGCTCGGCAGATCCTGCAGAAGGAAGGAGTGCGGGCGTTTTATAAAGGTTACATACCTAACATACTTGGCATCATCCCATACGCCGGCATTGACTTGGCCGTCTACGAGacccTGAAGAACGTGTGGTTACAGAGACACAGCTCTGGCTCAGCTGACCCcggtgtgtttgtgcttgtcGGATGTGGTACGGTTTCCAGCACATGTGGCCAGCTGGCATCGTACCCGCTCGCCCTGATCCGAACCCGCATGCAGGCACAGGcaacGGTGAAAGGCGCCCCTCAGGTCTCTATGCTCTCTCTGTTCCGCAGCATCATGGCTCAGGAGGGCGTGGTGGGACTGTACCGTGGCATCGCGCCCAACTTCCTCAAGGTCATTCCCGCCGTCAGCATCTCCTACGTGGTGTACGAACACATGAGGAAAGTACTGGGAGTgggaaagtgagacagagagagagagagagagagagagagagagaacaatgcTCTGATGGTTGTTGTATAGAAGTCTCAATGTCAGAGGATAGACAGAATAAGAAatgagaaagaaggaagaatgaGGGAAAAGCTTGTTAATGTACTCCATGATGGAGAGACGAATTGACCAAAGAGTGGATTTGCTCCTAAAGCCAGAGAAGATGAACACTCAAGTTTTACATTCTGACTCAAAATCAACAGGGCTACACTCCAGtcttctgtaataaataaataaaaggattaatcaataaaattagtttataatatattttaaatatgcaaaaaaaaaaaaaccttgtgacAGCTGACATCGATGTTTTACAAACTGTAAGCAAGACTGTAACCTGTAAAACTTTGGTACGTTGttatttctccattttcttgGTGTTTATTTGTGCTGTTGATCAACAGGGTCCTCACATTCAGACTCACAGGCtgtcctcttcaggaggtgaaatgaaCGCTAAAGTGTATGTTATTGCTTAGAAGTaagagtgggtgtgtgtgttgtgcaagATATGTATACCGTATATTCCCCAGACTATAAAACCTGTAGCATCTTTTGTGACTCATACATGCTATCTAGCATCGTTTTTTGCATTGGTTTAAGTGTGATATGGTATTTATGGTAAGTTATTGGACGGTGAACATCTTCATAAGGTTTAGCATGCTGAGGATGGACTTACAGAGGGATATTTTCAGGCCTGACAGACGGCTTATAGGATTATAGTCTGGAAAATACGGTATAAATGAGCATGTgctacatttttaatacaagtGTAGGTTGTGTACTAGTGAGCATGGGTTATATTTTATAACATGTAAGAGACTGGATCTATTTTCTTAACCGTTGAGTGGAGGTGTGTGAATGAAACAATGGAAAAGTGTGTTTCAGATCCCTTTTTACTTCACTTATGCCTGTACTCACTGCTCAGATATGTGAAACTGGGACAAGTTTAATCTTGTTAAAGACCAACAGATGCACTGTGTTTGGATTTGATTCCACTTTGCTTGAAGTctctttgggaaaaaaaattaaaaaattatggacccaaattcaatttaaatgtcCTTGGACTCTGCAGTTCCACCAGATCACCACTAGGGGAGAGTGTTTATTGCCATGTGCAAATCCTAATAGTGCAGTAAAGAGTCTCCACCTAGTGGTGATCTGGTGGAACTGCATAGGGTCAAAGCTAATTTACAACGAATTTACGtccatatttttattcataaagaCGAACACAGAGTATCCATGGGTTCTCAATAAGTTTTAATTATcccaaatttacattttataccgATTAAATAGtcttaaattcaaataaatgtagCTTTTCCACA

Function

GO: NA

KEGG:

id description
K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU446486 lncRNA downstream 62428 15881973 ~ 15883423 (-) True G376961
TU446449 lncRNA downstream 123346 15812366 ~ 15822505 (-) True G376934
TU446293 lncRNA downstream 166149 15778247 ~ 15779702 (-) True G376840
TU446236 lncRNA downstream 228905 15716192 ~ 15716946 (-) True G376807
TU446210 lncRNA downstream 262761 15681161 ~ 15683090 (-) True G376786
TU446509 lncRNA upstream 8676 15963956 ~ 15970091 (-) False vps54
TU446680 lncRNA upstream 210418 16165698 ~ 16169196 (-) False G377087
TU446681 lncRNA upstream 210418 16165698 ~ 16169196 (-) True G377087
TU446675 lncRNA upstream 223330 16178610 ~ 16179122 (-) True G377084
TU446676 lncRNA upstream 223382 16178662 ~ 16179122 (-) False G377084
XM_034300061.1 mRNA downstream 3121 15929753 ~ 15942730 (-) True khsrp
XM_034300062.1 mRNA downstream 3122 15929753 ~ 15942729 (-) False khsrp
XM_026931906.2 mRNA downstream 50856 15886599 ~ 15894995 (-) True avpi1
XM_034300075.1 mRNA downstream 76297 15859404 ~ 15869554 (-) True cdc25d
XM_034300052.1 mRNA upstream 8596 15963876 ~ 15984959 (-) True vps54
XM_026931851.2 mRNA upstream 31507 15986787 ~ 15999994 (-) False LOC113537394
XM_034300055.1 mRNA upstream 31507 15986787 ~ 15999994 (-) False LOC113537394
XM_026931850.2 mRNA upstream 31507 15986787 ~ 15999994 (-) True LOC113537394
XM_034300054.1 mRNA upstream 56992 16012272 ~ 16024511 (-) False LOC113537693
TU446429 other downstream 3165 15933637 ~ 15942686 (-) False khsrp
TU446479 other downstream 25298 15917628 ~ 15920553 (-) True G376956
TU446066 other downstream 487646 15455779 ~ 15458205 (-) False dpy30
TU446067 other downstream 488768 15455779 ~ 15457083 (-) False dpy30
TU446065 other downstream 488824 15455779 ~ 15457027 (-) False dpy30
TU446671 other upstream 197639 16152919 ~ 16155481 (-) False zgc:158803
TU446672 other upstream 200328 16155608 ~ 16164370 (-) False zgc:158803
XR_004577334.1 other upstream 470174 16425454 ~ 16475431 (-) False LOC113537389
TU447143 other upstream 889732 16845012 ~ 16851663 (-) True G377416
TU447144 other upstream 889732 16845012 ~ 16845602 (-) False G377416

Expression Profile