Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026932104.2 |
| length | 1214 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | emp1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 11275262 ~ 11280128 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443185 | lncRNA | downstream | 32425 | 11238241 ~ 11242837 (-) | True | G374198 |
| TU443184 | lncRNA | downstream | 32425 | 11238717 ~ 11242837 (-) | False | G374198 |
| TU443180 | lncRNA | downstream | 37831 | 11237062 ~ 11237431 (-) | True | G374196 |
| TU443094 | lncRNA | downstream | 127589 | 11147454 ~ 11147673 (-) | True | G374111 |
| TU443088 | lncRNA | downstream | 135451 | 11139183 ~ 11139811 (-) | True | G374105 |
| TU443231 | lncRNA | upstream | 78715 | 11358843 ~ 11360421 (-) | True | G374230 |
| TU443391 | lncRNA | upstream | 313838 | 11593966 ~ 11594981 (-) | True | G374370 |
| TU443394 | lncRNA | upstream | 315064 | 11595192 ~ 11596239 (-) | True | G374371 |
| TU443474 | lncRNA | upstream | 388865 | 11668993 ~ 11669256 (-) | True | G374442 |
| TU443528 | lncRNA | upstream | 472446 | 11752574 ~ 11755115 (-) | True | G374495 |
| XM_034299986.1 | mRNA | downstream | 16787 | 11247809 ~ 11258475 (-) | True | si:ch211-243a20.3 |
| XM_026931676.2 | mRNA | downstream | 223150 | 11046759 ~ 11052112 (-) | True | trappc5 |
| XM_026932266.2 | mRNA | downstream | 229197 | 11025293 ~ 11046065 (-) | True | mcoln1a |
| XM_034300386.1 | mRNA | downstream | 255282 | 11004546 ~ 11019980 (-) | False | si:ch211-214c7.4 |
| XM_026931664.2 | mRNA | downstream | 257558 | 11001667 ~ 11017704 (-) | False | si:ch211-214c7.4 |
| XM_026932121.2 | mRNA | upstream | 22655 | 11302783 ~ 11308486 (-) | False | LOC113537574 |
| XM_026932120.2 | mRNA | upstream | 22655 | 11302783 ~ 11308486 (-) | True | LOC113537574 |
| XM_026932169.2 | mRNA | upstream | 32637 | 11312765 ~ 11352381 (-) | False | si:ch211-239f4.1 |
| XM_026932167.2 | mRNA | upstream | 32637 | 11312765 ~ 11352381 (-) | False | si:ch211-239f4.1 |
| XM_034300294.1 | mRNA | upstream | 32637 | 11312765 ~ 11352381 (-) | True | si:ch211-239f4.1 |
| TU442843 | other | downstream | 402716 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 1356522 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 2668422 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 2842838 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 2946236 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| trnar-ucu_14 | other | upstream | 192752 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 2028910 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 2043954 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 2045389 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 2045865 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
