Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403780.2 |
| length | 957 |
| RNA type | misc_RNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | LOC113537623 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 5942039 ~ 5952313 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU439651 | lncRNA | downstream | 46741 | 5892326 ~ 5895688 (-) | True | G371121 |
| XR_004577356.1 | lncRNA | downstream | 50632 | 5886846 ~ 5891797 (-) | True | LOC117596178 |
| TU439645 | lncRNA | downstream | 56817 | 5880476 ~ 5885612 (-) | True | G371117 |
| XR_004577342.1 | lncRNA | downstream | 424049 | 5510716 ~ 5518380 (-) | True | LOC117596170 |
| TU439411 | lncRNA | downstream | 434060 | 5508102 ~ 5508369 (-) | True | G370942 |
| TU439680 | lncRNA | upstream | 41176 | 5993489 ~ 5994747 (-) | True | G371147 |
| TU439686 | lncRNA | upstream | 45690 | 5998003 ~ 5998159 (-) | True | G371152 |
| TU439687 | lncRNA | upstream | 46535 | 5998848 ~ 5999474 (-) | True | G371153 |
| TU439665 | lncRNA | upstream | 48866 | 6001179 ~ 6001613 (-) | True | G371135 |
| TU439664 | lncRNA | upstream | 49525 | 6001838 ~ 6004790 (-) | True | G371134 |
| XM_026931713.2 | mRNA | downstream | 22230 | 5913959 ~ 5920199 (-) | True | mrpl39 |
| XM_026931654.2 | mRNA | downstream | 33562 | 5896336 ~ 5908867 (-) | False | jam2a |
| XM_026931653.2 | mRNA | downstream | 33562 | 5896336 ~ 5908867 (-) | True | jam2a |
| XM_026931827.2 | mRNA | downstream | 346334 | 5589772 ~ 5596095 (-) | False | n6amt1 |
| XM_034300092.1 | mRNA | downstream | 346493 | 5589772 ~ 5595936 (-) | True | n6amt1 |
| XM_034300231.1 | mRNA | upstream | 11439 | 5963752 ~ 5969065 (-) | True | mrpl16 |
| XM_026932062.2 | mRNA | upstream | 18727 | 5971040 ~ 5973439 (-) | True | txnl4b |
| XM_026931773.2 | mRNA | upstream | 24064 | 5976377 ~ 5983797 (-) | True | blzf1 |
| XM_034300228.1 | mRNA | upstream | 24064 | 5976377 ~ 5983574 (-) | False | blzf1 |
| XM_026932021.2 | mRNA | upstream | 63413 | 6015726 ~ 6033393 (-) | True | tpp2 |
| XR_004577341.1 | other | downstream | 395397 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403738.2 | other | downstream | 395397 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403737.2 | other | downstream | 395397 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_004577339.1 | other | downstream | 395397 | 5534472 ~ 5547032 (-) | False | LOC113537235 |
| XR_004577340.1 | other | downstream | 395397 | 5536781 ~ 5547032 (-) | False | LOC113537235 |
| XR_004577328.1 | other | upstream | 67374 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_004577329.1 | other | upstream | 406326 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| XR_004577289.1 | other | upstream | 1106522 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| TU440391 | other | upstream | 1106522 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| TU440780 | other | upstream | 1765950 | 7718263 ~ 7724795 (-) | True | G372086 |
