Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034299898.1 |
| length | 501 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC117596110 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 16915413 ~ 16916826 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU447151 | lncRNA | downstream | 56704 | 16856779 ~ 16858709 (-) | True | G377422 |
| TU447084 | lncRNA | downstream | 173424 | 16621167 ~ 16741989 (-) | False | slc25a10 |
| TU447085 | lncRNA | downstream | 228929 | 16645096 ~ 16686484 (-) | False | slc25a10 |
| TU447074 | lncRNA | downstream | 307866 | 16606330 ~ 16607547 (-) | True | G377359 |
| XR_004577292.1 | lncRNA | downstream | 315191 | 16598913 ~ 16600222 (-) | True | LOC113547464 |
| TU447172 | lncRNA | upstream | 78572 | 16995398 ~ 16995649 (-) | True | G377441 |
| TU447211 | lncRNA | upstream | 116077 | 17032903 ~ 17052265 (-) | True | G377474 |
| XR_004577336.1 | lncRNA | upstream | 151710 | 17068536 ~ 17078161 (-) | True | LOC117596165 |
| TU447707 | lncRNA | upstream | 325009 | 17241835 ~ 17253715 (-) | True | G377847 |
| TU447754 | lncRNA | upstream | 399725 | 17316551 ~ 17316980 (-) | True | G377874 |
| XM_034299897.1 | mRNA | downstream | 17411 | 16888764 ~ 16898002 (-) | True | LOC117596109 |
| XM_026931903.2 | mRNA | downstream | 42976 | 16865228 ~ 16872437 (-) | True | LOC113537435 |
| XM_026931856.2 | mRNA | downstream | 121692 | 16788121 ~ 16793721 (-) | True | LOC113537398 |
| XM_026931887.2 | mRNA | downstream | 172575 | 16739492 ~ 16742838 (-) | True | si:dkey-27j5.5 |
| XM_034299945.1 | mRNA | downstream | 214283 | 16700097 ~ 16701130 (-) | True | LOC113537431 |
| XM_034299899.1 | mRNA | upstream | 27 | 16916853 ~ 16920580 (-) | True | LOC117596111 |
| XM_026931891.2 | mRNA | upstream | 26290 | 16943116 ~ 16948799 (-) | True | LOC113537424 |
| XM_026932303.1 | mRNA | upstream | 31987 | 16948813 ~ 16955184 (-) | True | LOC113537678 |
| XM_034299901.1 | mRNA | upstream | 58780 | 16975606 ~ 16990016 (-) | True | LOC113537677 |
| XM_026932097.2 | mRNA | upstream | 192327 | 17109153 ~ 17118898 (-) | True | LOC113537557 |
| TU447143 | other | downstream | 63750 | 16845012 ~ 16851663 (-) | True | G377416 |
| TU447144 | other | downstream | 69811 | 16845012 ~ 16845602 (-) | False | G377416 |
| XR_004577334.1 | other | downstream | 439982 | 16425454 ~ 16475431 (-) | False | LOC113537389 |
| TU446672 | other | downstream | 751043 | 16155608 ~ 16164370 (-) | False | zgc:158803 |
| TU446671 | other | downstream | 759932 | 16152919 ~ 16155481 (-) | False | zgc:158803 |
| TU447682 | other | upstream | 265906 | 17182732 ~ 17194992 (-) | False | LOC113525650 |
| TU447735 | other | upstream | 349403 | 17266229 ~ 17268030 (-) | True | G377862 |
| TU447860 | other | upstream | 791174 | 17708000 ~ 17712592 (-) | False | ubl5 |
| TU447895 | other | upstream | 886434 | 17803260 ~ 17814445 (-) | True | G377994 |
| XR_004577358.1 | other | upstream | 1246720 | 18163546 ~ 18166960 (-) | False | LOC113524896 |
