Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034300123.1 |
| length | 1048 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC117596142 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 17244768 ~ 17249333 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU447299 | lncRNA | upstream | 42150 | 17182776 ~ 17202618 (+) | True | G377529 |
| TU447297 | lncRNA | upstream | 69664 | 17172237 ~ 17175104 (+) | False | LOC113525655 |
| TU447240 | lncRNA | upstream | 136098 | 17108459 ~ 17108670 (+) | True | G377499 |
| TU447233 | lncRNA | upstream | 143345 | 17101208 ~ 17101423 (+) | False | LOC113537672 |
| TU447230 | lncRNA | upstream | 146886 | 17097681 ~ 17097882 (+) | False | LOC113537672 |
| TU447343 | lncRNA | downstream | 67227 | 17316560 ~ 17316971 (+) | True | G377569 |
| TU447382 | lncRNA | downstream | 166071 | 17415404 ~ 17427856 (+) | True | G377604 |
| TU447424 | lncRNA | downstream | 317473 | 17566806 ~ 17568970 (+) | False | LOC113526395 |
| TU447429 | lncRNA | downstream | 319727 | 17569060 ~ 17569467 (+) | False | LOC113526395 |
| TU447431 | lncRNA | downstream | 325428 | 17574761 ~ 17585043 (+) | True | G377644 |
| XM_026912226.2 | mRNA | upstream | 20602 | 17222700 ~ 17224166 (+) | True | LOC113525656 |
| XM_034299904.1 | mRNA | upstream | 69685 | 17156898 ~ 17175083 (+) | True | LOC113525655 |
| XM_034299938.1 | mRNA | upstream | 72622 | 17167068 ~ 17172146 (+) | True | LOC117596117 |
| XM_034299939.1 | mRNA | upstream | 72622 | 17167068 ~ 17172146 (+) | False | LOC117596117 |
| XM_026912222.2 | mRNA | upstream | 88395 | 17150751 ~ 17156373 (+) | False | LOC113525652 |
| XM_026913774.2 | mRNA | downstream | 5744 | 17255077 ~ 17262224 (+) | True | LOC113526590 |
| XM_034300119.1 | mRNA | downstream | 6567 | 17255900 ~ 17262224 (+) | False | LOC113526590 |
| XM_026914153.2 | mRNA | downstream | 51609 | 17300942 ~ 17306270 (+) | False | LOC113526801 |
| XM_026914152.2 | mRNA | downstream | 51821 | 17301154 ~ 17306270 (+) | True | LOC113526801 |
| XM_026914085.2 | mRNA | downstream | 58282 | 17307615 ~ 17320360 (+) | True | LOC113526760 |
| XR_004577315.1 | other | upstream | 389752 | 16822550 ~ 16855016 (+) | False | b3gntl1 |
| TU446960 | other | upstream | 680252 | 16561383 ~ 16564516 (+) | True | G377269 |
| TU446758 | other | upstream | 900144 | 16340768 ~ 16344624 (+) | False | G377132 |
| XR_004577301.1 | other | upstream | 928383 | 16290730 ~ 16316385 (+) | False | LOC113537689 |
| TU447578 | other | downstream | 806291 | 18055624 ~ 18056805 (+) | True | G377747 |
| TU447579 | other | downstream | 813085 | 18062418 ~ 18068946 (+) | True | G377748 |
| TU447580 | other | downstream | 813085 | 18062418 ~ 18068946 (+) | False | G377748 |
| TU447581 | other | downstream | 813085 | 18062418 ~ 18068946 (+) | False | G377748 |
| trnak-uuu_20 | other | downstream | 870332 | 18119665 ~ 18119737 (+) | True | trnak-uuu_20 |
