Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403798.1 |
| length | 133 |
| RNA type | ncRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC113537776 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14038854 ~ 14038986 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU445042 | lncRNA | downstream | 64760 | 13972336 ~ 13974094 (-) | False | klf5a |
| XR_004577299.1 | lncRNA | downstream | 178080 | 13853076 ~ 13860774 (-) | True | LOC117596131 |
| TU444800 | lncRNA | downstream | 202321 | 13836098 ~ 13836533 (-) | True | G375615 |
| TU444799 | lncRNA | downstream | 203874 | 13832468 ~ 13834980 (-) | True | G375614 |
| XR_004577284.1 | lncRNA | downstream | 208283 | 13829181 ~ 13830571 (-) | True | LOC117596119 |
| TU445091 | lncRNA | upstream | 39978 | 14078964 ~ 14085441 (-) | True | G375864 |
| TU445072 | lncRNA | upstream | 67236 | 14106222 ~ 14180614 (-) | True | rnf11a |
| TU445099 | lncRNA | upstream | 82512 | 14121498 ~ 14125258 (-) | True | G375871 |
| TU445153 | lncRNA | upstream | 235341 | 14274327 ~ 14275118 (-) | False | dand5 |
| TU445312 | lncRNA | upstream | 283198 | 14322184 ~ 14340390 (-) | True | G376038 |
| XM_026932387.2 | mRNA | downstream | 22703 | 13982745 ~ 14016151 (-) | False | pibf1 |
| XM_034300346.1 | mRNA | downstream | 22769 | 13982745 ~ 14016085 (-) | True | pibf1 |
| XM_026932388.2 | mRNA | downstream | 22770 | 13982745 ~ 14016084 (-) | False | pibf1 |
| XM_026931668.2 | mRNA | downstream | 58603 | 13972851 ~ 13980251 (-) | False | klf5a |
| XM_034300398.1 | mRNA | downstream | 59185 | 13972851 ~ 13979669 (-) | True | klf5a |
| XM_034299882.1 | mRNA | upstream | 29189 | 14068175 ~ 14073205 (-) | True | LOC113537289 |
| XM_026932340.2 | mRNA | upstream | 48999 | 14087985 ~ 14094855 (-) | True | best2 |
| XM_026932233.2 | mRNA | upstream | 57806 | 14096792 ~ 14105726 (-) | True | get3 |
| XM_026932239.2 | mRNA | upstream | 67220 | 14106206 ~ 14115530 (-) | False | rnf11a |
| XM_026932202.2 | mRNA | upstream | 97232 | 14136218 ~ 14247258 (-) | False | LOC113537614 |
| XR_003403796.1 | other | downstream | 256 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| XR_003403797.2 | other | downstream | 992 | 14037731 ~ 14037862 (-) | True | LOC113537775 |
| TU445045 | other | downstream | 7975 | 14027294 ~ 14030879 (-) | True | G375826 |
| XR_004577357.1 | other | downstream | 22769 | 13982745 ~ 14016085 (-) | False | pibf1 |
| TU444599 | other | downstream | 599319 | 13439219 ~ 13439535 (-) | True | G375428 |
| XR_004577346.1 | other | upstream | 235831 | 14274817 ~ 14275130 (-) | False | dand5 |
| TU445430 | other | upstream | 644116 | 14683102 ~ 14684328 (-) | False | G376143 |
| TU445400 | other | upstream | 658253 | 14697239 ~ 14712377 (-) | False | ifngr1 |
| TU446065 | other | upstream | 1416793 | 15455779 ~ 15457027 (-) | False | dpy30 |
| TU446066 | other | upstream | 1416793 | 15455779 ~ 15458205 (-) | False | dpy30 |
