Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577360.1 |
| length | 177 |
| RNA type | ncRNA |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC117596183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 4524502 ~ 4524784 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438835 | lncRNA | downstream | 77396 | 4446458 ~ 4447106 (-) | True | G370468 |
| TU438789 | lncRNA | downstream | 382374 | 4141922 ~ 4142128 (-) | True | G370425 |
| TU438781 | lncRNA | downstream | 537880 | 3986205 ~ 3986622 (-) | True | G370418 |
| TU438779 | lncRNA | downstream | 540923 | 3983111 ~ 3983579 (-) | True | G370416 |
| TU438778 | lncRNA | downstream | 541562 | 3981710 ~ 3982940 (-) | True | G370415 |
| TU439062 | lncRNA | upstream | 280096 | 4804880 ~ 4811748 (-) | True | G370665 |
| TU439059 | lncRNA | upstream | 371443 | 4896227 ~ 4914035 (-) | True | G370663 |
| TU439109 | lncRNA | upstream | 521256 | 5046040 ~ 5046246 (-) | True | G370699 |
| TU439112 | lncRNA | upstream | 534069 | 5058853 ~ 5059054 (-) | True | G370702 |
| TU439117 | lncRNA | upstream | 537360 | 5062144 ~ 5062436 (-) | True | G370705 |
| XM_026928684.2 | mRNA | downstream | 6514 | 4511270 ~ 4517988 (-) | True | cnpy3 |
| XM_034300309.1 | mRNA | downstream | 19763 | 4488149 ~ 4504739 (-) | True | LOC113535753 |
| XM_034299954.1 | mRNA | downstream | 906382 | 3611719 ~ 3618120 (-) | True | LOC113535432 |
| XM_026928713.2 | mRNA | downstream | 907610 | 3611719 ~ 3616892 (-) | False | LOC113535432 |
| XM_026928711.2 | mRNA | downstream | 1354017 | 3083070 ~ 3170485 (-) | True | gpc5a |
| XM_026929209.2 | mRNA | upstream | 71646 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929207.2 | mRNA | upstream | 71646 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929211.2 | mRNA | upstream | 71646 | 4596430 ~ 4618297 (-) | False | cfap221 |
| XM_026929208.2 | mRNA | upstream | 71646 | 4596430 ~ 4618296 (-) | True | cfap221 |
| XM_026929210.2 | mRNA | upstream | 71646 | 4596430 ~ 4618295 (-) | False | cfap221 |
| XR_004577367.1 | other | downstream | 61288 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
| XR_004577366.1 | other | downstream | 63187 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577365.1 | other | downstream | 65079 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_003403643.2 | other | downstream | 66961 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| TU438365 | other | downstream | 1671291 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| TU439054 | other | upstream | 318545 | 4843329 ~ 4889381 (-) | True | G370658 |
| XR_004577341.1 | other | upstream | 1009631 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403738.2 | other | upstream | 1009631 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403737.2 | other | upstream | 1009631 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403739.2 | other | upstream | 1009631 | 5534415 ~ 5547031 (-) | False | LOC113537235 |
