Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577365.1 |
| length | 107 |
| RNA type | ncRNA |
| GC content | 0.46 |
| exon number | 1 |
| gene id | LOC117596196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 4459317 ~ 4459423 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438835 | lncRNA | downstream | 12211 | 4446458 ~ 4447106 (-) | True | G370468 |
| TU438789 | lncRNA | downstream | 317189 | 4141922 ~ 4142128 (-) | True | G370425 |
| TU438781 | lncRNA | downstream | 472695 | 3986205 ~ 3986622 (-) | True | G370418 |
| TU438779 | lncRNA | downstream | 475738 | 3983111 ~ 3983579 (-) | True | G370416 |
| TU438778 | lncRNA | downstream | 476377 | 3981710 ~ 3982940 (-) | True | G370415 |
| TU439062 | lncRNA | upstream | 345457 | 4804880 ~ 4811748 (-) | True | G370665 |
| TU439059 | lncRNA | upstream | 436804 | 4896227 ~ 4914035 (-) | True | G370663 |
| TU439109 | lncRNA | upstream | 586617 | 5046040 ~ 5046246 (-) | True | G370699 |
| TU439112 | lncRNA | upstream | 599430 | 5058853 ~ 5059054 (-) | True | G370702 |
| TU439117 | lncRNA | upstream | 602721 | 5062144 ~ 5062436 (-) | True | G370705 |
| XM_034299954.1 | mRNA | downstream | 841197 | 3611719 ~ 3618120 (-) | True | LOC113535432 |
| XM_026928713.2 | mRNA | downstream | 842425 | 3611719 ~ 3616892 (-) | False | LOC113535432 |
| XM_026928711.2 | mRNA | downstream | 1288832 | 3083070 ~ 3170485 (-) | True | gpc5a |
| XM_034300420.1 | mRNA | downstream | 1567232 | 2874908 ~ 2892085 (-) | True | LOC117596192 |
| XM_026928791.2 | mRNA | downstream | 1620528 | 2833613 ~ 2838789 (-) | True | LOC113535482 |
| XM_034300309.1 | mRNA | upstream | 28726 | 4488149 ~ 4504739 (-) | True | LOC113535753 |
| XM_026928684.2 | mRNA | upstream | 51847 | 4511270 ~ 4517988 (-) | True | cnpy3 |
| XM_026929209.2 | mRNA | upstream | 137007 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929207.2 | mRNA | upstream | 137007 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929211.2 | mRNA | upstream | 137007 | 4596430 ~ 4618297 (-) | False | cfap221 |
| XR_003403643.2 | other | downstream | 1776 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| TU438365 | other | downstream | 1606106 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403632.2 | other | downstream | 1884846 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU437816 | other | downstream | 2664093 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 2859573 | 1541362 ~ 1599744 (-) | False | nrp2a |
| XR_004577366.1 | other | upstream | 1786 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577367.1 | other | upstream | 3685 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
| XR_004577360.1 | other | upstream | 65079 | 4524502 ~ 4524784 (-) | True | LOC117596183 |
| TU439054 | other | upstream | 383906 | 4843329 ~ 4889381 (-) | True | G370658 |
| XR_004577341.1 | other | upstream | 1074992 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
