Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU462678 |
| length | 310 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 3 |
| gene id | G390077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 1944549 ~ 1945455 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU462598 | lncRNA | upstream | 87648 | 1856490 ~ 1856901 (+) | True | G390023 |
| TU462594 | lncRNA | upstream | 90380 | 1842073 ~ 1854169 (+) | True | G390020 |
| TU462593 | lncRNA | upstream | 93975 | 1836764 ~ 1850574 (+) | True | G390019 |
| TU462557 | lncRNA | upstream | 183637 | 1754717 ~ 1760912 (+) | True | G389985 |
| TU462540 | lncRNA | upstream | 193910 | 1747131 ~ 1750639 (+) | False | rnf24 |
| TU463037 | lncRNA | downstream | 410878 | 2356333 ~ 2356794 (+) | True | G390411 |
| TU463039 | lncRNA | downstream | 419099 | 2364554 ~ 2368266 (+) | False | LOC113545784 |
| TU463040 | lncRNA | downstream | 419099 | 2364554 ~ 2368266 (+) | False | LOC113545784 |
| TU463087 | lncRNA | downstream | 560610 | 2506065 ~ 2506498 (+) | True | G390456 |
| XR_004577500.1 | lncRNA | downstream | 1191173 | 3136628 ~ 3171123 (+) | True | LOC117596362 |
| XM_026945308.2 | mRNA | upstream | 193787 | 1715265 ~ 1750762 (+) | True | rnf24 |
| XM_026945307.2 | mRNA | upstream | 193787 | 1715267 ~ 1750762 (+) | False | rnf24 |
| XM_026945165.2 | mRNA | upstream | 311777 | 1619297 ~ 1632772 (+) | True | adra1d |
| XM_026945346.2 | mRNA | upstream | 624473 | 1315659 ~ 1320076 (+) | True | lrrtm1 |
| XM_034301324.1 | mRNA | upstream | 965223 | 961694 ~ 979326 (+) | True | suclg1 |
| XM_034301127.1 | mRNA | downstream | 17789 | 1963244 ~ 2185917 (+) | False | LOC113545749 |
| XM_026945277.2 | mRNA | downstream | 82849 | 2028304 ~ 2185917 (+) | False | LOC113545749 |
| XM_026945278.2 | mRNA | downstream | 82849 | 2028304 ~ 2185917 (+) | False | LOC113545749 |
| XM_026945279.2 | mRNA | downstream | 82850 | 2028305 ~ 2185917 (+) | False | LOC113545749 |
| XM_026945280.2 | mRNA | downstream | 82850 | 2028305 ~ 2185917 (+) | False | LOC113545749 |
| TU461743 | other | upstream | 994142 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 1139333 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 1143983 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 4280902 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 4280902 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 4670504 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 4670504 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 4670504 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
