Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU463846 |
| length | 856 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G391143 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 3400928 ~ 3401783 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU463627 | lncRNA | upstream | 103 | 3399181 ~ 3400825 (+) | False | LOC113545782 |
| XR_004577500.1 | lncRNA | upstream | 229805 | 3136628 ~ 3171123 (+) | True | LOC117596362 |
| TU463087 | lncRNA | upstream | 894430 | 2506065 ~ 2506498 (+) | True | G390456 |
| TU463039 | lncRNA | upstream | 1032662 | 2364554 ~ 2368266 (+) | False | LOC113545784 |
| TU463040 | lncRNA | upstream | 1032662 | 2364554 ~ 2368266 (+) | False | LOC113545784 |
| XR_003404650.2 | lncRNA | downstream | 747252 | 4149035 ~ 4175902 (+) | False | LOC113545714 |
| XR_004577481.1 | lncRNA | downstream | 760860 | 4162643 ~ 4175902 (+) | False | LOC113545714 |
| TU464077 | lncRNA | downstream | 764663 | 4166446 ~ 4172011 (+) | True | LOC113545714 |
| TU464117 | lncRNA | downstream | 811461 | 4213244 ~ 4213828 (+) | True | G391386 |
| XR_004577489.1 | lncRNA | downstream | 1043673 | 4445456 ~ 4459340 (+) | True | LOC117596354 |
| XM_026945367.2 | mRNA | upstream | 378 | 3359377 ~ 3400550 (+) | True | LOC113545782 |
| XM_026945368.2 | mRNA | upstream | 3484 | 3359377 ~ 3397444 (+) | False | LOC113545782 |
| XM_034301316.1 | mRNA | upstream | 3745 | 3359377 ~ 3397183 (+) | False | LOC113545782 |
| XM_026945369.2 | mRNA | upstream | 3745 | 3360596 ~ 3397183 (+) | False | LOC113545782 |
| XM_026945286.2 | mRNA | upstream | 67751 | 3293191 ~ 3333177 (+) | False | LOC113545751 |
| XM_026945170.2 | mRNA | downstream | 154570 | 3556353 ~ 4144835 (+) | False | nrxn2b |
| XM_026945169.2 | mRNA | downstream | 194371 | 3596154 ~ 4147068 (+) | True | nrxn2b |
| XM_034301108.1 | mRNA | downstream | 194371 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945179.2 | mRNA | downstream | 194371 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945174.2 | mRNA | downstream | 194371 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| TU461743 | other | upstream | 2450521 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 2595712 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 2600362 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 2824574 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 2824574 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 3214176 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 3214176 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 3214176 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
