Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404650.2 |
| length | 840 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC113545714 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 4149035 ~ 4175902 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU463846 | lncRNA | upstream | 747252 | 3400928 ~ 3401783 (+) | True | G391143 |
| TU463627 | lncRNA | upstream | 748210 | 3399181 ~ 3400825 (+) | False | LOC113545782 |
| XR_004577500.1 | lncRNA | upstream | 977912 | 3136628 ~ 3171123 (+) | True | LOC117596362 |
| TU463087 | lncRNA | upstream | 1642537 | 2506065 ~ 2506498 (+) | True | G390456 |
| TU463039 | lncRNA | upstream | 1780769 | 2364554 ~ 2368266 (+) | False | LOC113545784 |
| TU464117 | lncRNA | downstream | 37342 | 4213244 ~ 4213828 (+) | True | G391386 |
| XR_004577489.1 | lncRNA | downstream | 269554 | 4445456 ~ 4459340 (+) | True | LOC117596354 |
| TU464251 | lncRNA | downstream | 288025 | 4463927 ~ 4479339 (+) | False | LOC113545745 |
| TU464291 | lncRNA | downstream | 527866 | 4703768 ~ 4705703 (+) | True | G391500 |
| TU464304 | lncRNA | downstream | 569019 | 4744921 ~ 4746529 (+) | True | G391512 |
| XM_026945169.2 | mRNA | upstream | 1967 | 3596154 ~ 4147068 (+) | True | nrxn2b |
| XM_034301108.1 | mRNA | upstream | 1967 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945179.2 | mRNA | upstream | 1967 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945174.2 | mRNA | upstream | 1967 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945180.2 | mRNA | upstream | 1967 | 3596154 ~ 4147068 (+) | False | nrxn2b |
| XM_026945404.2 | mRNA | downstream | 41126 | 4217028 ~ 4219878 (+) | False | c28h11orf68 |
| XM_026945405.2 | mRNA | downstream | 41126 | 4217028 ~ 4219878 (+) | False | c28h11orf68 |
| XM_034301362.1 | mRNA | downstream | 41296 | 4217198 ~ 4219878 (+) | False | c28h11orf68 |
| XM_026945410.2 | mRNA | downstream | 41432 | 4217334 ~ 4219878 (+) | False | c28h11orf68 |
| XM_026945411.2 | mRNA | downstream | 41602 | 4217504 ~ 4219878 (+) | False | c28h11orf68 |
| TU461743 | other | upstream | 3198628 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 3343819 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 3348469 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 2050455 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 2050455 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 2440057 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 2440057 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 2440057 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
