Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU464495 |
| length | 560 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G391665 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5672610 ~ 5673169 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577525.1 | lncRNA | upstream | 22747 | 5648334 ~ 5649863 (+) | True | LOC117596392 |
| TU464391 | lncRNA | upstream | 130249 | 5542035 ~ 5542361 (+) | True | G391586 |
| TU464467 | lncRNA | upstream | 131154 | 5541164 ~ 5541456 (+) | True | G391643 |
| TU464384 | lncRNA | upstream | 136195 | 5534935 ~ 5536415 (+) | True | G391580 |
| TU464390 | lncRNA | upstream | 138340 | 5531838 ~ 5534270 (+) | True | G391585 |
| TU464496 | lncRNA | downstream | 1863 | 5675032 ~ 5675931 (+) | True | G391666 |
| TU464497 | lncRNA | downstream | 4294 | 5677463 ~ 5677698 (+) | True | G391667 |
| TU464498 | lncRNA | downstream | 5198 | 5678367 ~ 5679191 (+) | True | G391668 |
| TU464499 | lncRNA | downstream | 7280 | 5680449 ~ 5680688 (+) | True | G391669 |
| TU464500 | lncRNA | downstream | 8561 | 5681730 ~ 5682723 (+) | True | G391670 |
| XM_026943206.2 | mRNA | upstream | 60995 | 5606322 ~ 5611615 (+) | True | si:cabz01076231.1 |
| XM_026943207.2 | mRNA | upstream | 60995 | 5606930 ~ 5611615 (+) | False | si:cabz01076231.1 |
| XM_034301335.1 | mRNA | upstream | 79041 | 5589900 ~ 5593569 (+) | True | LOC113544404 |
| XM_034301336.1 | mRNA | upstream | 79041 | 5589900 ~ 5593569 (+) | False | LOC113544404 |
| XM_026945167.2 | mRNA | upstream | 229885 | 5437417 ~ 5442725 (+) | True | epdl1 |
| XM_026943219.2 | mRNA | downstream | 85772 | 5758941 ~ 5773253 (+) | True | tmem154 |
| XM_026943222.2 | mRNA | downstream | 85772 | 5758941 ~ 5773253 (+) | False | tmem154 |
| XM_026943223.2 | mRNA | downstream | 85773 | 5758942 ~ 5773253 (+) | False | tmem154 |
| XM_026943218.2 | mRNA | downstream | 85775 | 5758944 ~ 5773253 (+) | False | tmem154 |
| XM_026943220.2 | mRNA | downstream | 85776 | 5758945 ~ 5773253 (+) | False | tmem154 |
| TU461743 | other | upstream | 4722203 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 4867394 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 4872044 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 553188 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 553188 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 942790 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 942790 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 942790 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
