Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU464506 |
| length | 705 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G391673 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5689350 ~ 5690399 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU464507 | lncRNA | upstream | 2234 | 5686409 ~ 5687116 (+) | True | G391674 |
| TU464505 | lncRNA | upstream | 5333 | 5683798 ~ 5684017 (+) | True | G391672 |
| TU464504 | lncRNA | upstream | 5729 | 5683382 ~ 5683621 (+) | True | G391671 |
| TU464500 | lncRNA | upstream | 6627 | 5681730 ~ 5682723 (+) | True | G391670 |
| TU464499 | lncRNA | upstream | 8662 | 5680449 ~ 5680688 (+) | True | G391669 |
| TU465441 | lncRNA | downstream | 75502 | 5765901 ~ 5766205 (+) | True | G392541 |
| TU465463 | lncRNA | downstream | 123805 | 5814204 ~ 5815071 (+) | True | G392559 |
| TU465450 | lncRNA | downstream | 141145 | 5831544 ~ 5856234 (+) | False | LOC113544283 |
| TU465466 | lncRNA | downstream | 165895 | 5856294 ~ 5859687 (+) | True | G392562 |
| TU465470 | lncRNA | downstream | 192484 | 5882883 ~ 5901167 (+) | True | G392565 |
| XM_026943206.2 | mRNA | upstream | 77735 | 5606322 ~ 5611615 (+) | True | si:cabz01076231.1 |
| XM_026943207.2 | mRNA | upstream | 77735 | 5606930 ~ 5611615 (+) | False | si:cabz01076231.1 |
| XM_034301335.1 | mRNA | upstream | 95781 | 5589900 ~ 5593569 (+) | True | LOC113544404 |
| XM_034301336.1 | mRNA | upstream | 95781 | 5589900 ~ 5593569 (+) | False | LOC113544404 |
| XM_026945167.2 | mRNA | upstream | 246625 | 5437417 ~ 5442725 (+) | True | epdl1 |
| XM_026943219.2 | mRNA | downstream | 68542 | 5758941 ~ 5773253 (+) | True | tmem154 |
| XM_026943222.2 | mRNA | downstream | 68542 | 5758941 ~ 5773253 (+) | False | tmem154 |
| XM_026943223.2 | mRNA | downstream | 68543 | 5758942 ~ 5773253 (+) | False | tmem154 |
| XM_026943218.2 | mRNA | downstream | 68545 | 5758944 ~ 5773253 (+) | False | tmem154 |
| XM_026943220.2 | mRNA | downstream | 68546 | 5758945 ~ 5773253 (+) | False | tmem154 |
| TU461743 | other | upstream | 4738943 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 4884134 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 4888784 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 535958 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 535958 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 925560 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 925560 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 925560 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
