Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU465463 |
| length | 844 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G392559 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5814204 ~ 5815071 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465441 | lncRNA | upstream | 47999 | 5765901 ~ 5766205 (+) | True | G392541 |
| TU464506 | lncRNA | upstream | 123805 | 5689350 ~ 5690399 (+) | True | G391673 |
| TU464507 | lncRNA | upstream | 127088 | 5686409 ~ 5687116 (+) | True | G391674 |
| TU464505 | lncRNA | upstream | 130187 | 5683798 ~ 5684017 (+) | True | G391672 |
| TU464504 | lncRNA | upstream | 130583 | 5683382 ~ 5683621 (+) | True | G391671 |
| TU465450 | lncRNA | downstream | 16473 | 5831544 ~ 5856234 (+) | False | LOC113544283 |
| TU465466 | lncRNA | downstream | 41223 | 5856294 ~ 5859687 (+) | True | G392562 |
| TU465470 | lncRNA | downstream | 67812 | 5882883 ~ 5901167 (+) | True | G392565 |
| TU465494 | lncRNA | downstream | 151658 | 5966729 ~ 5969232 (+) | True | G392578 |
| TU465488 | lncRNA | downstream | 193951 | 6009022 ~ 6028337 (+) | True | G392575 |
| XM_026943219.2 | mRNA | upstream | 40951 | 5758941 ~ 5773253 (+) | True | tmem154 |
| XM_026943222.2 | mRNA | upstream | 40951 | 5758941 ~ 5773253 (+) | False | tmem154 |
| XM_026943223.2 | mRNA | upstream | 40951 | 5758942 ~ 5773253 (+) | False | tmem154 |
| XM_026943218.2 | mRNA | upstream | 40951 | 5758944 ~ 5773253 (+) | False | tmem154 |
| XM_026943220.2 | mRNA | upstream | 40951 | 5758945 ~ 5773253 (+) | False | tmem154 |
| XM_034301182.1 | mRNA | downstream | 16912 | 5831983 ~ 5910592 (+) | True | LOC113544283 |
| XM_034301285.1 | mRNA | downstream | 150413 | 5965484 ~ 5979895 (+) | True | gatb |
| XM_026942936.2 | mRNA | downstream | 150413 | 5965484 ~ 5979895 (+) | False | gatb |
| XM_034301286.1 | mRNA | downstream | 150413 | 5965484 ~ 5976746 (+) | False | gatb |
| XM_026943116.2 | mRNA | downstream | 194192 | 6009263 ~ 6026147 (+) | False | sh3d19 |
| TU461743 | other | upstream | 4863797 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 5008988 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 5013638 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 411286 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 411286 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 800888 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 800888 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 800888 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
