Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU465494 |
| length | 350 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G392578 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5966729 ~ 5969232 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465470 | lncRNA | upstream | 65562 | 5882883 ~ 5901167 (+) | True | G392565 |
| TU465466 | lncRNA | upstream | 107042 | 5856294 ~ 5859687 (+) | True | G392562 |
| TU465450 | lncRNA | upstream | 110495 | 5831544 ~ 5856234 (+) | False | LOC113544283 |
| TU465463 | lncRNA | upstream | 151658 | 5814204 ~ 5815071 (+) | True | G392559 |
| TU465441 | lncRNA | upstream | 200524 | 5765901 ~ 5766205 (+) | True | G392541 |
| TU465488 | lncRNA | downstream | 39790 | 6009022 ~ 6028337 (+) | True | G392575 |
| TU465532 | lncRNA | downstream | 200732 | 6169964 ~ 6213340 (+) | True | G392610 |
| TU465571 | lncRNA | downstream | 399095 | 6368327 ~ 6376260 (+) | True | G392644 |
| TU465606 | lncRNA | downstream | 509018 | 6478250 ~ 6480082 (+) | True | G392679 |
| TU465608 | lncRNA | downstream | 511717 | 6480949 ~ 6481497 (+) | True | G392681 |
| XM_034301182.1 | mRNA | upstream | 56137 | 5831983 ~ 5910592 (+) | True | LOC113544283 |
| XM_026943219.2 | mRNA | upstream | 193476 | 5758941 ~ 5773253 (+) | True | tmem154 |
| XM_026943116.2 | mRNA | downstream | 40031 | 6009263 ~ 6026147 (+) | False | sh3d19 |
| XM_026943118.2 | mRNA | downstream | 40031 | 6009263 ~ 6026147 (+) | False | sh3d19 |
| XM_026943115.2 | mRNA | downstream | 40032 | 6009264 ~ 6026147 (+) | True | sh3d19 |
| XM_034301240.1 | mRNA | downstream | 40032 | 6009264 ~ 6026147 (+) | False | sh3d19 |
| XM_026943117.2 | mRNA | downstream | 40032 | 6009264 ~ 6026147 (+) | False | sh3d19 |
| TU461743 | other | upstream | 5016322 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 5161513 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 5166163 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 257125 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 257125 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 646727 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 646727 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 646727 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
