Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU466091 |
| length | 807 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G393056 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 6663754 ~ 6665049 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465609 | lncRNA | upstream | 180654 | 6482538 ~ 6483100 (+) | True | G392682 |
| TU465608 | lncRNA | upstream | 182257 | 6480949 ~ 6481497 (+) | True | G392681 |
| TU465606 | lncRNA | upstream | 183672 | 6478250 ~ 6480082 (+) | True | G392679 |
| TU465571 | lncRNA | upstream | 287494 | 6368327 ~ 6376260 (+) | True | G392644 |
| TU465532 | lncRNA | upstream | 450414 | 6169964 ~ 6213340 (+) | True | G392610 |
| TU466166 | lncRNA | downstream | 55960 | 6720882 ~ 6745244 (+) | False | G393113 |
| TU466168 | lncRNA | downstream | 55960 | 6720882 ~ 6745244 (+) | True | G393113 |
| TU466170 | lncRNA | downstream | 55960 | 6720882 ~ 6742535 (+) | False | G393113 |
| TU466172 | lncRNA | downstream | 55960 | 6720882 ~ 6725255 (+) | False | G393113 |
| TU466173 | lncRNA | downstream | 55960 | 6720882 ~ 6742210 (+) | False | G393113 |
| XM_026943168.2 | mRNA | upstream | 20340 | 6636928 ~ 6643414 (+) | True | khnyn |
| XM_034301344.1 | mRNA | upstream | 21135 | 6636928 ~ 6642619 (+) | False | khnyn |
| XM_026943176.2 | mRNA | upstream | 36620 | 6620904 ~ 6627134 (+) | True | si:dkeyp-74b6.2 |
| XM_034301080.1 | mRNA | upstream | 45072 | 6614859 ~ 6618682 (+) | False | LOC113544406 |
| XM_034301079.1 | mRNA | upstream | 45072 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XM_026943064.2 | mRNA | downstream | 8216 | 6673138 ~ 6687356 (+) | True | si:cabz01101003.1 |
| XM_034301392.1 | mRNA | downstream | 23598 | 6688520 ~ 6696420 (+) | False | emc4 |
| XM_026942872.2 | mRNA | downstream | 24153 | 6689075 ~ 6696420 (+) | True | emc4 |
| XM_026943278.2 | mRNA | downstream | 34150 | 6699072 ~ 6710755 (+) | True | lpcat4 |
| XM_034301357.1 | mRNA | downstream | 55923 | 6720845 ~ 6745254 (+) | True | nop10 |
| XR_004577479.1 | other | upstream | 45072 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | upstream | 45072 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | upstream | 45072 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404502.2 | other | upstream | 45072 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_004577480.1 | other | upstream | 45072 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_004577472.1 | other | downstream | 232071 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| TU466595 | other | downstream | 762696 | 7427618 ~ 7430910 (+) | True | G393467 |
| TU467438 | other | downstream | 1594006 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 2031275 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 2471035 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
