Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU466402 |
| length | 724 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G393293 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 7055328 ~ 7061670 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU466225 | lncRNA | upstream | 106020 | 6944819 ~ 6949308 (+) | True | G393150 |
| XR_004577471.1 | lncRNA | upstream | 156316 | 6896993 ~ 6899012 (+) | True | LOC117596330 |
| TU466210 | lncRNA | upstream | 159857 | 6843423 ~ 6895471 (+) | True | G393140 |
| TU466410 | lncRNA | downstream | 24127 | 7085797 ~ 7086015 (+) | True | G393301 |
| XR_004577478.1 | lncRNA | downstream | 71426 | 7133096 ~ 7151569 (+) | True | LOC113544421 |
| XR_004577477.1 | lncRNA | downstream | 93707 | 7155377 ~ 7163031 (+) | True | LOC117596340 |
| TU466466 | lncRNA | downstream | 116150 | 7177820 ~ 7245118 (+) | True | G393351 |
| TU466519 | lncRNA | downstream | 229568 | 7291238 ~ 7349517 (+) | True | G393394 |
| XM_026942923.2 | mRNA | upstream | 13416 | 7034279 ~ 7041912 (+) | True | LOC113544234 |
| XM_026943225.2 | mRNA | upstream | 22598 | 7000205 ~ 7032730 (+) | True | casq1b |
| XM_026942875.2 | mRNA | upstream | 108605 | 6939707 ~ 6946723 (+) | False | zgc:92594 |
| XM_026942876.2 | mRNA | upstream | 108605 | 6940267 ~ 6946723 (+) | False | zgc:92594 |
| XM_026942877.2 | mRNA | upstream | 108605 | 6940267 ~ 6946723 (+) | False | zgc:92594 |
| XM_026942963.2 | mRNA | downstream | 239969 | 7301639 ~ 7306530 (+) | True | LOC113544270 |
| XM_034301380.1 | mRNA | downstream | 339699 | 7401369 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026942870.2 | mRNA | downstream | 339702 | 7401372 ~ 7409804 (+) | True | si:ch211-63p21.1 |
| XM_026942869.2 | mRNA | downstream | 339704 | 7401374 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026943190.2 | mRNA | downstream | 351526 | 7413196 ~ 7419635 (+) | True | LOC113544382 |
| XR_004577472.1 | other | upstream | 154388 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404500.2 | other | upstream | 436646 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU466595 | other | downstream | 365948 | 7427618 ~ 7430910 (+) | True | G393467 |
| TU467438 | other | downstream | 1197258 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 1634527 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 2074287 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 3039342 | 10101012 ~ 10116924 (+) | True | agpat4 |
