Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU466576 |
| length | 688 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 4 |
| gene id | G393450 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 7367880 ~ 7371501 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU466519 | lncRNA | upstream | 18363 | 7291238 ~ 7349517 (+) | True | G393394 |
| TU466517 | lncRNA | upstream | 35779 | 7310813 ~ 7332101 (+) | False | G393394 |
| TU466466 | lncRNA | upstream | 122762 | 7177820 ~ 7245118 (+) | True | G393351 |
| XR_004577477.1 | lncRNA | upstream | 204849 | 7155377 ~ 7163031 (+) | True | LOC117596340 |
| XR_004577478.1 | lncRNA | upstream | 216311 | 7133096 ~ 7151569 (+) | True | LOC113544421 |
| TU466613 | lncRNA | downstream | 77133 | 7448634 ~ 7528555 (+) | True | G393484 |
| TU467149 | lncRNA | downstream | 550644 | 7922145 ~ 7922346 (+) | True | G393994 |
| TU467152 | lncRNA | downstream | 552445 | 7923946 ~ 7924834 (+) | True | G393997 |
| XR_003404486.2 | lncRNA | downstream | 619231 | 7990732 ~ 8006786 (+) | True | LOC113544216 |
| TU467277 | lncRNA | downstream | 689302 | 8060803 ~ 8061192 (+) | True | G394103 |
| XM_026942963.2 | mRNA | upstream | 61350 | 7301639 ~ 7306530 (+) | True | LOC113544270 |
| XM_026942923.2 | mRNA | upstream | 325968 | 7034279 ~ 7041912 (+) | True | LOC113544234 |
| XM_026943225.2 | mRNA | upstream | 335150 | 7000205 ~ 7032730 (+) | True | casq1b |
| XM_026942874.2 | mRNA | upstream | 421157 | 6940476 ~ 6946723 (+) | False | zgc:92594 |
| XM_034301380.1 | mRNA | downstream | 29868 | 7401369 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026942870.2 | mRNA | downstream | 29871 | 7401372 ~ 7409804 (+) | True | si:ch211-63p21.1 |
| XM_026942869.2 | mRNA | downstream | 29873 | 7401374 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026943190.2 | mRNA | downstream | 41695 | 7413196 ~ 7419635 (+) | True | LOC113544382 |
| XM_026943265.2 | mRNA | downstream | 248599 | 7620100 ~ 7636047 (+) | True | LOC113544435 |
| XR_004577472.1 | other | upstream | 466940 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404500.2 | other | upstream | 749198 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU466595 | other | downstream | 56117 | 7427618 ~ 7430910 (+) | True | G393467 |
| TU467438 | other | downstream | 887427 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 1324696 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 1764456 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 2729511 | 10101012 ~ 10116924 (+) | True | agpat4 |
