Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU466613 |
| length | 408 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 2 |
| gene id | G393484 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 7448634 ~ 7528555 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU466576 | lncRNA | upstream | 77133 | 7367880 ~ 7371501 (+) | True | G393450 |
| TU466519 | lncRNA | upstream | 99117 | 7291238 ~ 7349517 (+) | True | G393394 |
| TU466517 | lncRNA | upstream | 116533 | 7310813 ~ 7332101 (+) | False | G393394 |
| TU466466 | lncRNA | upstream | 203516 | 7177820 ~ 7245118 (+) | True | G393351 |
| XR_004577477.1 | lncRNA | upstream | 285603 | 7155377 ~ 7163031 (+) | True | LOC117596340 |
| TU467149 | lncRNA | downstream | 393590 | 7922145 ~ 7922346 (+) | True | G393994 |
| TU467152 | lncRNA | downstream | 395391 | 7923946 ~ 7924834 (+) | True | G393997 |
| XR_003404486.2 | lncRNA | downstream | 462177 | 7990732 ~ 8006786 (+) | True | LOC113544216 |
| TU467277 | lncRNA | downstream | 532248 | 8060803 ~ 8061192 (+) | True | G394103 |
| TU467316 | lncRNA | downstream | 608727 | 8137282 ~ 8137508 (+) | True | G394142 |
| XM_026943190.2 | mRNA | upstream | 28999 | 7413196 ~ 7419635 (+) | True | LOC113544382 |
| XM_034301380.1 | mRNA | upstream | 38830 | 7401369 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026942870.2 | mRNA | upstream | 38830 | 7401372 ~ 7409804 (+) | True | si:ch211-63p21.1 |
| XM_026942869.2 | mRNA | upstream | 38830 | 7401374 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026942963.2 | mRNA | upstream | 142104 | 7301639 ~ 7306530 (+) | True | LOC113544270 |
| XM_026943265.2 | mRNA | downstream | 91545 | 7620100 ~ 7636047 (+) | True | LOC113544435 |
| XM_026943269.2 | mRNA | downstream | 430328 | 7958883 ~ 7978619 (+) | False | LOC113544437 |
| XM_026943268.2 | mRNA | downstream | 430330 | 7958885 ~ 7978619 (+) | True | LOC113544437 |
| XM_026943170.2 | mRNA | downstream | 488657 | 8017212 ~ 8051220 (+) | True | efemp1 |
| XM_026943172.2 | mRNA | downstream | 488657 | 8017212 ~ 8051220 (+) | False | efemp1 |
| TU466595 | other | upstream | 17724 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 547694 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404500.2 | other | upstream | 829952 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU467438 | other | downstream | 730373 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 1167642 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 1607402 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 2572457 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 2670768 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
