Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU467321 |
| length | 747 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G394147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 8141847 ~ 8142593 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU467316 | lncRNA | upstream | 4339 | 8137282 ~ 8137508 (+) | True | G394142 |
| TU467277 | lncRNA | upstream | 80655 | 8060803 ~ 8061192 (+) | True | G394103 |
| XR_003404486.2 | lncRNA | upstream | 135061 | 7990732 ~ 8006786 (+) | True | LOC113544216 |
| TU467152 | lncRNA | upstream | 217013 | 7923946 ~ 7924834 (+) | True | G393997 |
| TU467149 | lncRNA | upstream | 219501 | 7922145 ~ 7922346 (+) | True | G393994 |
| TU467324 | lncRNA | downstream | 2850 | 8145443 ~ 8146117 (+) | True | G394150 |
| TU467327 | lncRNA | downstream | 5961 | 8148554 ~ 8149032 (+) | True | G394153 |
| TU467329 | lncRNA | downstream | 8810 | 8151403 ~ 8152388 (+) | True | G394155 |
| TU467330 | lncRNA | downstream | 9867 | 8152460 ~ 8153778 (+) | True | G394156 |
| TU467413 | lncRNA | downstream | 92086 | 8234679 ~ 8235160 (+) | True | G394229 |
| XM_026943203.2 | mRNA | upstream | 16409 | 8067433 ~ 8125438 (+) | True | LOC113544397 |
| XM_026943204.2 | mRNA | upstream | 16409 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943205.2 | mRNA | upstream | 16409 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943172.2 | mRNA | upstream | 90627 | 8017212 ~ 8051220 (+) | False | efemp1 |
| XM_026943106.2 | mRNA | downstream | 11458 | 8154051 ~ 8168988 (+) | True | cilk1 |
| XM_026943123.2 | mRNA | downstream | 65077 | 8207670 ~ 8237492 (+) | True | vit |
| XM_026943124.2 | mRNA | downstream | 65077 | 8207670 ~ 8237492 (+) | False | vit |
| XM_026943125.2 | mRNA | downstream | 65077 | 8207670 ~ 8237492 (+) | False | vit |
| XM_026943127.2 | mRNA | downstream | 65077 | 8207670 ~ 8237492 (+) | False | vit |
| TU466595 | other | upstream | 710937 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 1240907 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404501.2 | other | upstream | 1523165 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU467438 | other | downstream | 116335 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 553604 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 993364 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 1958419 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 2056730 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
