Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU467327 |
| length | 479 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G394153 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 8148554 ~ 8149032 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU467324 | lncRNA | upstream | 2437 | 8145443 ~ 8146117 (+) | True | G394150 |
| TU467321 | lncRNA | upstream | 5961 | 8141847 ~ 8142593 (+) | True | G394147 |
| TU467316 | lncRNA | upstream | 11046 | 8137282 ~ 8137508 (+) | True | G394142 |
| TU467277 | lncRNA | upstream | 87362 | 8060803 ~ 8061192 (+) | True | G394103 |
| XR_003404486.2 | lncRNA | upstream | 141768 | 7990732 ~ 8006786 (+) | True | LOC113544216 |
| TU467329 | lncRNA | downstream | 2371 | 8151403 ~ 8152388 (+) | True | G394155 |
| TU467330 | lncRNA | downstream | 3428 | 8152460 ~ 8153778 (+) | True | G394156 |
| TU467413 | lncRNA | downstream | 85647 | 8234679 ~ 8235160 (+) | True | G394229 |
| TU467447 | lncRNA | downstream | 130502 | 8279534 ~ 8280204 (+) | True | G394260 |
| TU467449 | lncRNA | downstream | 135974 | 8285006 ~ 8285339 (+) | True | G394262 |
| XM_026943203.2 | mRNA | upstream | 23116 | 8067433 ~ 8125438 (+) | True | LOC113544397 |
| XM_026943204.2 | mRNA | upstream | 23116 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943205.2 | mRNA | upstream | 23116 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943172.2 | mRNA | upstream | 97334 | 8017212 ~ 8051220 (+) | False | efemp1 |
| XM_026943106.2 | mRNA | downstream | 5019 | 8154051 ~ 8168988 (+) | True | cilk1 |
| XM_026943123.2 | mRNA | downstream | 58638 | 8207670 ~ 8237492 (+) | True | vit |
| XM_026943124.2 | mRNA | downstream | 58638 | 8207670 ~ 8237492 (+) | False | vit |
| XM_026943125.2 | mRNA | downstream | 58638 | 8207670 ~ 8237492 (+) | False | vit |
| XM_026943127.2 | mRNA | downstream | 58638 | 8207670 ~ 8237492 (+) | False | vit |
| TU466595 | other | upstream | 717644 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 1247614 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404501.2 | other | upstream | 1529872 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU467438 | other | downstream | 109896 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 547165 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 986925 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 1951980 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 2050291 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
