Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU467413 |
| length | 291 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G394229 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 8234679 ~ 8235160 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU467330 | lncRNA | upstream | 80901 | 8152460 ~ 8153778 (+) | True | G394156 |
| TU467329 | lncRNA | upstream | 82291 | 8151403 ~ 8152388 (+) | True | G394155 |
| TU467327 | lncRNA | upstream | 85647 | 8148554 ~ 8149032 (+) | True | G394153 |
| TU467324 | lncRNA | upstream | 88562 | 8145443 ~ 8146117 (+) | True | G394150 |
| TU467321 | lncRNA | upstream | 92086 | 8141847 ~ 8142593 (+) | True | G394147 |
| TU467447 | lncRNA | downstream | 44374 | 8279534 ~ 8280204 (+) | True | G394260 |
| TU467449 | lncRNA | downstream | 49846 | 8285006 ~ 8285339 (+) | True | G394262 |
| TU467489 | lncRNA | downstream | 185522 | 8420682 ~ 8440437 (+) | True | G394291 |
| TU467505 | lncRNA | downstream | 231109 | 8466269 ~ 8466602 (+) | True | G394306 |
| TU467590 | lncRNA | downstream | 425536 | 8660696 ~ 8661230 (+) | True | G394373 |
| XM_026943106.2 | mRNA | upstream | 65691 | 8154051 ~ 8168988 (+) | True | cilk1 |
| XM_026943203.2 | mRNA | upstream | 109241 | 8067433 ~ 8125438 (+) | True | LOC113544397 |
| XM_026943204.2 | mRNA | upstream | 109241 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943205.2 | mRNA | upstream | 109241 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| XM_026943172.2 | mRNA | upstream | 183459 | 8017212 ~ 8051220 (+) | False | efemp1 |
| XM_026943233.2 | mRNA | downstream | 5479 | 8240639 ~ 8252667 (+) | True | si:ch1073-291c23.2 |
| XM_034301136.1 | mRNA | downstream | 28819 | 8263979 ~ 8279460 (+) | True | ddx21 |
| XM_034301137.1 | mRNA | downstream | 28819 | 8263979 ~ 8279460 (+) | False | ddx21 |
| XM_034301138.1 | mRNA | downstream | 28832 | 8263992 ~ 8279460 (+) | False | ddx21 |
| XM_034301321.1 | mRNA | downstream | 54131 | 8289291 ~ 8301011 (+) | True | LOC113544354 |
| TU466595 | other | upstream | 803769 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 1333739 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404501.2 | other | upstream | 1615997 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU467438 | other | downstream | 23768 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 461037 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 900797 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 1865852 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 1964163 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
