Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU467447 |
| length | 671 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G394260 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 8279534 ~ 8280204 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU467413 | lncRNA | upstream | 44374 | 8234679 ~ 8235160 (+) | True | G394229 |
| TU467330 | lncRNA | upstream | 125756 | 8152460 ~ 8153778 (+) | True | G394156 |
| TU467329 | lncRNA | upstream | 127146 | 8151403 ~ 8152388 (+) | True | G394155 |
| TU467327 | lncRNA | upstream | 130502 | 8148554 ~ 8149032 (+) | True | G394153 |
| TU467324 | lncRNA | upstream | 133417 | 8145443 ~ 8146117 (+) | True | G394150 |
| TU467449 | lncRNA | downstream | 4802 | 8285006 ~ 8285339 (+) | True | G394262 |
| TU467489 | lncRNA | downstream | 140478 | 8420682 ~ 8440437 (+) | True | G394291 |
| TU467505 | lncRNA | downstream | 186065 | 8466269 ~ 8466602 (+) | True | G394306 |
| TU467590 | lncRNA | downstream | 380492 | 8660696 ~ 8661230 (+) | True | G394373 |
| TU467767 | lncRNA | downstream | 572340 | 8852544 ~ 8852767 (+) | True | G394520 |
| XM_034301136.1 | mRNA | upstream | 74 | 8263979 ~ 8279460 (+) | True | ddx21 |
| XM_034301137.1 | mRNA | upstream | 74 | 8263979 ~ 8279460 (+) | False | ddx21 |
| XM_034301138.1 | mRNA | upstream | 74 | 8263992 ~ 8279460 (+) | False | ddx21 |
| XM_026943233.2 | mRNA | upstream | 26867 | 8240639 ~ 8252667 (+) | True | si:ch1073-291c23.2 |
| XM_026943123.2 | mRNA | upstream | 42042 | 8207670 ~ 8237492 (+) | True | vit |
| XM_034301321.1 | mRNA | downstream | 9087 | 8289291 ~ 8301011 (+) | True | LOC113544354 |
| XM_034301039.1 | mRNA | downstream | 49461 | 8329665 ~ 8350126 (+) | True | LOC113544353 |
| XM_026943138.2 | mRNA | downstream | 98210 | 8378414 ~ 8389447 (+) | True | chs1 |
| XM_026943208.2 | mRNA | downstream | 120590 | 8400794 ~ 8410541 (+) | True | LOC113544399 |
| XM_026943209.2 | mRNA | downstream | 120590 | 8400794 ~ 8410541 (+) | False | LOC113544399 |
| TU467438 | other | upstream | 20232 | 8258928 ~ 8259302 (+) | True | G394251 |
| TU466595 | other | upstream | 848624 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 1378594 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404501.2 | other | upstream | 1660852 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| trnal-cag_18 | other | downstream | 415993 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 855753 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 1820808 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 1919119 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
| XR_004577523.1 | other | downstream | 1919119 | 10199323 ~ 10224804 (+) | False | LOC113544300 |
