Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026943207.2 |
| length | 1047 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | si:cabz01076231.1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5606322 ~ 5611615 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU464391 | lncRNA | upstream | 64569 | 5542035 ~ 5542361 (+) | True | G391586 |
| TU464467 | lncRNA | upstream | 65474 | 5541164 ~ 5541456 (+) | True | G391643 |
| TU464384 | lncRNA | upstream | 70515 | 5534935 ~ 5536415 (+) | True | G391580 |
| TU464390 | lncRNA | upstream | 72660 | 5531838 ~ 5534270 (+) | True | G391585 |
| TU464380 | lncRNA | upstream | 117615 | 5486476 ~ 5489315 (+) | False | G391576 |
| XR_004577525.1 | lncRNA | downstream | 36719 | 5648334 ~ 5649863 (+) | True | LOC117596392 |
| TU464495 | lncRNA | downstream | 60995 | 5672610 ~ 5673169 (+) | True | G391665 |
| TU464496 | lncRNA | downstream | 63417 | 5675032 ~ 5675931 (+) | True | G391666 |
| TU464497 | lncRNA | downstream | 65848 | 5677463 ~ 5677698 (+) | True | G391667 |
| TU464498 | lncRNA | downstream | 66752 | 5678367 ~ 5679191 (+) | True | G391668 |
| XM_034301335.1 | mRNA | upstream | 13361 | 5589900 ~ 5593569 (+) | True | LOC113544404 |
| XM_034301336.1 | mRNA | upstream | 13361 | 5589900 ~ 5593569 (+) | False | LOC113544404 |
| XM_026945167.2 | mRNA | upstream | 164205 | 5437417 ~ 5442725 (+) | True | epdl1 |
| XM_034301088.1 | mRNA | upstream | 170049 | 5429188 ~ 5436881 (+) | False | alpk1 |
| XM_026943219.2 | mRNA | downstream | 147326 | 5758941 ~ 5773253 (+) | True | tmem154 |
| XM_026943222.2 | mRNA | downstream | 147326 | 5758941 ~ 5773253 (+) | False | tmem154 |
| XM_026943223.2 | mRNA | downstream | 147327 | 5758942 ~ 5773253 (+) | False | tmem154 |
| XM_026943218.2 | mRNA | downstream | 147329 | 5758944 ~ 5773253 (+) | False | tmem154 |
| XM_026943220.2 | mRNA | downstream | 147330 | 5758945 ~ 5773253 (+) | False | tmem154 |
| TU461743 | other | upstream | 4656523 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 4801714 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 4806364 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 614742 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 614742 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 1004344 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 1004344 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 1004344 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
