Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026945357.2 |
| length | 752 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 3 |
| gene id | LOC113545774 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 4407367 ~ 4408332 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU464117 | lncRNA | upstream | 193539 | 4213244 ~ 4213828 (+) | True | G391386 |
| XR_003404650.2 | lncRNA | upstream | 231465 | 4149035 ~ 4175902 (+) | False | LOC113545714 |
| XR_004577481.1 | lncRNA | upstream | 231465 | 4162643 ~ 4175902 (+) | False | LOC113545714 |
| TU464077 | lncRNA | upstream | 235356 | 4166446 ~ 4172011 (+) | True | LOC113545714 |
| TU463846 | lncRNA | upstream | 1005584 | 3400928 ~ 3401783 (+) | True | G391143 |
| XR_004577489.1 | lncRNA | downstream | 37124 | 4445456 ~ 4459340 (+) | True | LOC117596354 |
| TU464251 | lncRNA | downstream | 55595 | 4463927 ~ 4479339 (+) | False | LOC113545745 |
| TU464291 | lncRNA | downstream | 295436 | 4703768 ~ 4705703 (+) | True | G391500 |
| TU464304 | lncRNA | downstream | 336589 | 4744921 ~ 4746529 (+) | True | G391512 |
| XR_004577463.1 | lncRNA | downstream | 455964 | 4864296 ~ 5074406 (+) | True | LOC117596306 |
| XM_026945338.2 | mRNA | upstream | 2461 | 4403983 ~ 4404906 (+) | True | LOC113545765 |
| XM_026945336.2 | mRNA | upstream | 3625 | 4334610 ~ 4403742 (+) | True | LOC113545764 |
| XM_026945362.2 | mRNA | upstream | 134930 | 4248870 ~ 4272437 (+) | True | LOC113545777 |
| XM_026945411.2 | mRNA | upstream | 187489 | 4217504 ~ 4219878 (+) | False | c28h11orf68 |
| XM_026945352.2 | mRNA | downstream | 3430 | 4411762 ~ 4412705 (+) | True | LOC113545771 |
| XM_026945353.2 | mRNA | downstream | 6518 | 4414850 ~ 4416213 (+) | True | LOC113545772 |
| XM_034301208.1 | mRNA | downstream | 55566 | 4463898 ~ 4856974 (+) | True | LOC113545745 |
| XM_026945220.2 | mRNA | downstream | 75755 | 4484087 ~ 4856974 (+) | False | LOC113545745 |
| XM_026945234.2 | mRNA | downstream | 75755 | 4484087 ~ 4856974 (+) | False | LOC113545745 |
| TU461743 | other | upstream | 3456960 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 3602151 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 3606801 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 1818025 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 1818025 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 2207627 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 2207627 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 2207627 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
