Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026945385.2 |
| length | 585 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC113545788 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 5367444 ~ 5369498 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006810 | transport | biological_process |
| GO:0005215 | transporter activity | molecular_function |
| GO:0008289 | lipid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577518.1 | lncRNA | upstream | 181787 | 5176090 ~ 5185657 (+) | True | LOC117596387 |
| XR_004577517.1 | lncRNA | upstream | 210737 | 5096248 ~ 5156707 (+) | True | LOC117596386 |
| XR_004577464.1 | lncRNA | upstream | 293038 | 4864296 ~ 5074406 (+) | False | LOC117596306 |
| TU464372 | lncRNA | downstream | 2543 | 5372041 ~ 5376797 (+) | True | G391574 |
| TU464420 | lncRNA | downstream | 35023 | 5404521 ~ 5404752 (+) | True | G391612 |
| TU464377 | lncRNA | downstream | 116978 | 5486476 ~ 5489315 (+) | True | G391576 |
| TU464378 | lncRNA | downstream | 116978 | 5486476 ~ 5489315 (+) | False | G391576 |
| TU464379 | lncRNA | downstream | 116978 | 5486476 ~ 5489315 (+) | False | G391576 |
| XM_026945370.2 | mRNA | upstream | 136005 | 5187559 ~ 5231439 (+) | True | LOC113545783 |
| XM_026945168.2 | mRNA | upstream | 288535 | 5074892 ~ 5078909 (+) | True | LOC113545709 |
| XM_026945253.2 | mRNA | upstream | 510470 | 4484089 ~ 4856974 (+) | False | LOC113545745 |
| XM_026945297.2 | mRNA | downstream | 44392 | 5413890 ~ 5419090 (+) | True | LOC113545754 |
| XM_026945293.2 | mRNA | downstream | 58539 | 5428037 ~ 5436881 (+) | False | alpk1 |
| XM_026945294.2 | mRNA | downstream | 58541 | 5428039 ~ 5436881 (+) | True | alpk1 |
| XM_034301088.1 | mRNA | downstream | 59690 | 5429188 ~ 5436881 (+) | False | alpk1 |
| XM_026945295.2 | mRNA | downstream | 59690 | 5429188 ~ 5436881 (+) | False | alpk1 |
| TU461743 | other | upstream | 4417037 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 4562228 | 804360 ~ 805216 (+) | True | G389525 |
| TU461981 | other | upstream | 4566878 | 790488 ~ 800566 (+) | False | G389524 |
| TU465523 | other | downstream | 856859 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | downstream | 856859 | 6226357 ~ 6239070 (+) | False | lrba |
| XR_004577479.1 | other | downstream | 1246461 | 6615959 ~ 6618682 (+) | True | LOC113544406 |
| XR_003404500.2 | other | downstream | 1246461 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| XR_003404501.2 | other | downstream | 1246461 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
