Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301080.1 |
| length | 926 |
| RNA type | mRNA |
| GC content | 0.36 |
| exon number | 4 |
| gene id | LOC113544406 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 6614859 ~ 6618682 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465609 | lncRNA | upstream | 131759 | 6482538 ~ 6483100 (+) | True | G392682 |
| TU465608 | lncRNA | upstream | 133362 | 6480949 ~ 6481497 (+) | True | G392681 |
| TU465606 | lncRNA | upstream | 134777 | 6478250 ~ 6480082 (+) | True | G392679 |
| TU465571 | lncRNA | upstream | 238599 | 6368327 ~ 6376260 (+) | True | G392644 |
| TU465532 | lncRNA | upstream | 401519 | 6169964 ~ 6213340 (+) | True | G392610 |
| TU466091 | lncRNA | downstream | 45072 | 6663754 ~ 6664922 (+) | True | G393056 |
| TU466092 | lncRNA | downstream | 45072 | 6663754 ~ 6665049 (+) | False | G393056 |
| TU466093 | lncRNA | downstream | 45072 | 6663754 ~ 6665049 (+) | False | G393056 |
| TU466166 | lncRNA | downstream | 102200 | 6720882 ~ 6745244 (+) | False | G393113 |
| TU466168 | lncRNA | downstream | 102200 | 6720882 ~ 6745244 (+) | True | G393113 |
| XM_034301268.1 | mRNA | upstream | 34930 | 6543110 ~ 6579929 (+) | False | LOC113544279 |
| XM_034301267.1 | mRNA | upstream | 34930 | 6543111 ~ 6579929 (+) | True | LOC113544279 |
| XM_034301186.1 | mRNA | upstream | 72679 | 6511588 ~ 6542180 (+) | True | heatr5b |
| XM_026943146.2 | mRNA | upstream | 152333 | 6415294 ~ 6462526 (+) | False | LOC113544357 |
| XM_026943176.2 | mRNA | downstream | 2222 | 6620904 ~ 6627134 (+) | True | si:dkeyp-74b6.2 |
| XM_026943168.2 | mRNA | downstream | 18246 | 6636928 ~ 6643414 (+) | True | khnyn |
| XM_034301344.1 | mRNA | downstream | 18246 | 6636928 ~ 6642619 (+) | False | khnyn |
| XM_026943061.2 | mRNA | downstream | 27709 | 6646391 ~ 6671237 (+) | True | LOC113544317 |
| XM_026943063.2 | mRNA | downstream | 27709 | 6646391 ~ 6671237 (+) | False | LOC113544317 |
| TU465523 | other | upstream | 375789 | 6226357 ~ 6239070 (+) | False | lrba |
| TU465524 | other | upstream | 375789 | 6226357 ~ 6239070 (+) | False | lrba |
| TU461743 | other | upstream | 5664452 | 934929 ~ 950407 (+) | False | G389438 |
| TU461983 | other | upstream | 5809643 | 804360 ~ 805216 (+) | True | G389525 |
| TU461978 | other | upstream | 5817530 | 793553 ~ 797329 (+) | False | G389524 |
| XR_004577472.1 | other | downstream | 278311 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| TU466595 | other | downstream | 808936 | 7427618 ~ 7430910 (+) | True | G393467 |
| TU467438 | other | downstream | 1640246 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 2077515 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 2517275 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
