Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404486.2 |
| length | 612 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113544216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 7990732 ~ 8006786 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU467152 | lncRNA | upstream | 65898 | 7923946 ~ 7924834 (+) | True | G393997 |
| TU467149 | lncRNA | upstream | 68386 | 7922145 ~ 7922346 (+) | True | G393994 |
| TU466613 | lncRNA | upstream | 462177 | 7448634 ~ 7528555 (+) | True | G393484 |
| TU466576 | lncRNA | upstream | 619231 | 7367880 ~ 7371501 (+) | True | G393450 |
| TU466519 | lncRNA | upstream | 641215 | 7291238 ~ 7349517 (+) | True | G393394 |
| TU467277 | lncRNA | downstream | 54017 | 8060803 ~ 8061192 (+) | True | G394103 |
| TU467316 | lncRNA | downstream | 130496 | 8137282 ~ 8137508 (+) | True | G394142 |
| TU467321 | lncRNA | downstream | 135061 | 8141847 ~ 8142593 (+) | True | G394147 |
| TU467324 | lncRNA | downstream | 138657 | 8145443 ~ 8146117 (+) | True | G394150 |
| TU467327 | lncRNA | downstream | 141768 | 8148554 ~ 8149032 (+) | True | G394153 |
| XM_026943269.2 | mRNA | upstream | 12113 | 7958883 ~ 7978619 (+) | False | LOC113544437 |
| XM_026943268.2 | mRNA | upstream | 12113 | 7958885 ~ 7978619 (+) | True | LOC113544437 |
| XM_026943265.2 | mRNA | upstream | 354685 | 7620100 ~ 7636047 (+) | True | LOC113544435 |
| XM_026943190.2 | mRNA | upstream | 571097 | 7413196 ~ 7419635 (+) | True | LOC113544382 |
| XM_034301380.1 | mRNA | upstream | 580928 | 7401369 ~ 7409804 (+) | False | si:ch211-63p21.1 |
| XM_026943170.2 | mRNA | downstream | 10426 | 8017212 ~ 8051220 (+) | True | efemp1 |
| XM_026943172.2 | mRNA | downstream | 10426 | 8017212 ~ 8051220 (+) | False | efemp1 |
| XM_026943173.2 | mRNA | downstream | 10426 | 8017212 ~ 8051220 (+) | False | efemp1 |
| XM_026943203.2 | mRNA | downstream | 60647 | 8067433 ~ 8125438 (+) | True | LOC113544397 |
| XM_026943204.2 | mRNA | downstream | 60647 | 8067433 ~ 8125438 (+) | False | LOC113544397 |
| TU466595 | other | upstream | 559822 | 7427618 ~ 7430910 (+) | True | G393467 |
| XR_004577472.1 | other | upstream | 1089792 | 6896993 ~ 6900940 (+) | False | LOC117596330 |
| XR_003404501.2 | other | upstream | 1372050 | 6615959 ~ 6618682 (+) | False | LOC113544406 |
| TU467438 | other | downstream | 252142 | 8258928 ~ 8259302 (+) | True | G394251 |
| trnal-cag_18 | other | downstream | 689411 | 8696197 ~ 8696279 (+) | True | trnal-cag_18 |
| XR_003404490.2 | other | downstream | 1129171 | 9135957 ~ 9137421 (+) | False | LOC113544250 |
| TU468433 | other | downstream | 2094226 | 10101012 ~ 10116924 (+) | True | agpat4 |
| XR_003404491.1 | other | downstream | 2192537 | 10199323 ~ 10239199 (+) | False | LOC113544300 |
