Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472265 |
| length | 594 |
| RNA type | TUCP |
| GC content | 0.40 |
| exon number | 2 |
| gene id | LOC117596396 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 473750 ~ 482008 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577543.1 | lncRNA | downstream | 57247 | 414465 ~ 417319 (-) | True | LOC117596419 |
| TU472224 | lncRNA | downstream | 167157 | 307118 ~ 307409 (-) | True | G398158 |
| XR_004577548.1 | lncRNA | downstream | 168693 | 305073 ~ 305873 (-) | False | LOC117596423 |
| XR_004577547.1 | lncRNA | downstream | 168693 | 305073 ~ 305873 (-) | True | LOC117596423 |
| XR_004577546.1 | lncRNA | downstream | 168693 | 305279 ~ 305873 (-) | False | LOC117596423 |
| TU472424 | lncRNA | upstream | 113110 | 595118 ~ 595989 (-) | True | G398304 |
| TU472461 | lncRNA | upstream | 160394 | 642402 ~ 644009 (-) | True | G398338 |
| TU472520 | lncRNA | upstream | 359928 | 841936 ~ 846790 (-) | True | G398393 |
| TU472521 | lncRNA | upstream | 365737 | 847745 ~ 848753 (-) | True | G398394 |
| TU472522 | lncRNA | upstream | 368442 | 850450 ~ 851339 (-) | True | G398395 |
| XM_026911532.2 | mRNA | downstream | 15383 | 418017 ~ 459183 (-) | False | LOC113525088 |
| XM_026911531.2 | mRNA | downstream | 15383 | 418017 ~ 459183 (-) | False | LOC113525088 |
| XM_026911529.2 | mRNA | downstream | 15383 | 418017 ~ 459183 (-) | False | LOC113525088 |
| XM_026911530.2 | mRNA | downstream | 15756 | 418017 ~ 458810 (-) | True | LOC113525088 |
| XM_026911533.2 | mRNA | downstream | 75380 | 373143 ~ 399186 (-) | False | LOC113525089 |
| XM_026911534.2 | mRNA | upstream | 46253 | 528261 ~ 561037 (-) | True | LOC113525090 |
| XM_026911521.2 | mRNA | upstream | 89693 | 571701 ~ 588652 (-) | False | LOC113525082 |
| XM_026911520.2 | mRNA | upstream | 89693 | 571701 ~ 588652 (-) | True | LOC113525082 |
| XM_034301443.1 | mRNA | upstream | 162040 | 644048 ~ 645951 (-) | True | LOC113547081 |
| XM_034301708.1 | mRNA | upstream | 170490 | 652498 ~ 661063 (-) | True | LOC117595703 |
| TU472228 | other | downstream | 149021 | 319734 ~ 325545 (-) | False | pick1 |
| trnar-ccu_18 | other | downstream | 163911 | 310583 ~ 310655 (-) | True | trnar-ccu_18 |
| TU472485 | other | upstream | 258235 | 740243 ~ 890280 (-) | False | LOC117596444 |
| TU472486 | other | upstream | 403694 | 885702 ~ 890280 (-) | True | LOC117596444 |
| TU472487 | other | upstream | 417520 | 899528 ~ 906361 (-) | False | fam234b |
| XR_004577594.1 | other | upstream | 425617 | 907625 ~ 907779 (-) | True | LOC117596481 |
| XR_004577595.1 | other | upstream | 428061 | 910069 ~ 910223 (-) | True | LOC117596482 |
