Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472490 |
| length | 255 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G398364 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 949692 ~ 996770 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472548 | lncRNA | downstream | 5206 | 942257 ~ 944486 (-) | True | G398413 |
| TU472532 | lncRNA | downstream | 7945 | 883189 ~ 941747 (-) | False | G398403 |
| TU472530 | lncRNA | downstream | 24621 | 883189 ~ 925071 (-) | True | G398403 |
| TU472497 | lncRNA | downstream | 67800 | 879025 ~ 881892 (-) | True | G398371 |
| TU472522 | lncRNA | downstream | 98353 | 850450 ~ 851339 (-) | True | G398395 |
| TU472569 | lncRNA | upstream | 18173 | 1014943 ~ 1083831 (-) | False | G398433 |
| TU472575 | lncRNA | upstream | 28650 | 1025420 ~ 1102347 (-) | True | G398437 |
| TU472570 | lncRNA | upstream | 29572 | 1026342 ~ 1083831 (-) | False | G398433 |
| TU472587 | lncRNA | upstream | 80058 | 1076828 ~ 1078028 (-) | True | G398446 |
| TU472568 | lncRNA | upstream | 86047 | 1082817 ~ 1083831 (-) | True | G398433 |
| XM_034301676.1 | mRNA | downstream | 43317 | 891920 ~ 906375 (-) | True | fam234b |
| XM_034301679.1 | mRNA | downstream | 59390 | 887935 ~ 890302 (-) | False | LOC117596444 |
| XM_026914681.2 | mRNA | downstream | 110251 | 833892 ~ 839441 (-) | False | LOC113527139 |
| XM_034301448.1 | mRNA | upstream | 111923 | 1108693 ~ 1111909 (-) | True | LOC117596399 |
| XM_026910221.2 | mRNA | upstream | 118864 | 1115634 ~ 1124106 (-) | False | LOC113524091 |
| XM_026910220.2 | mRNA | upstream | 118864 | 1115634 ~ 1124105 (-) | True | LOC113524091 |
| XM_034301450.1 | mRNA | upstream | 176630 | 1173400 ~ 1176207 (-) | True | LOC117596401 |
| XM_026910219.2 | mRNA | upstream | 246017 | 1242787 ~ 1250542 (-) | True | LOC113524089 |
| TU472541 | other | downstream | 29189 | 919264 ~ 920503 (-) | True | G398408 |
| XR_003403678.1 | other | downstream | 35340 | 914198 ~ 914352 (-) | True | LOC113536357 |
| XR_004577595.1 | other | downstream | 39469 | 910069 ~ 910223 (-) | True | LOC117596482 |
| XR_004577594.1 | other | downstream | 41913 | 907625 ~ 907779 (-) | True | LOC117596481 |
| TU472487 | other | downstream | 43331 | 899528 ~ 906361 (-) | False | fam234b |
| TU472656 | other | upstream | 279883 | 1276653 ~ 1281771 (-) | False | LOC117596427 |
| TU472657 | other | upstream | 279883 | 1276653 ~ 1317636 (-) | False | LOC117596427 |
| XR_004577580.1 | other | upstream | 464554 | 1461324 ~ 1462070 (-) | False | LOC117596459 |
| XR_004577579.1 | other | upstream | 464584 | 1461354 ~ 1462070 (-) | False | LOC117596459 |
| TU472900 | other | upstream | 572233 | 1569003 ~ 1591729 (-) | False | st13 |
