Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472521 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G398394 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 847745 ~ 848753 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472520 | lncRNA | downstream | 955 | 841936 ~ 846790 (-) | True | G398393 |
| TU472461 | lncRNA | downstream | 203736 | 642402 ~ 644009 (-) | True | G398338 |
| TU472424 | lncRNA | downstream | 251756 | 595118 ~ 595989 (-) | True | G398304 |
| XR_004577543.1 | lncRNA | downstream | 430426 | 414465 ~ 417319 (-) | True | LOC117596419 |
| TU472224 | lncRNA | downstream | 540336 | 307118 ~ 307409 (-) | True | G398158 |
| TU472522 | lncRNA | upstream | 1697 | 850450 ~ 851339 (-) | True | G398395 |
| TU472497 | lncRNA | upstream | 30272 | 879025 ~ 881892 (-) | True | G398371 |
| TU472530 | lncRNA | upstream | 34436 | 883189 ~ 925071 (-) | True | G398403 |
| TU472532 | lncRNA | upstream | 34436 | 883189 ~ 941747 (-) | False | G398403 |
| TU472495 | lncRNA | upstream | 46318 | 895071 ~ 950545 (-) | True | G398369 |
| XM_026914683.2 | mRNA | downstream | 8304 | 833892 ~ 839441 (-) | False | LOC113527139 |
| XM_034301595.1 | mRNA | downstream | 8304 | 833892 ~ 839441 (-) | False | LOC113527139 |
| XM_026914681.2 | mRNA | downstream | 8304 | 833892 ~ 839441 (-) | False | LOC113527139 |
| XM_034301594.1 | mRNA | downstream | 8304 | 833892 ~ 839441 (-) | True | LOC113527139 |
| XM_034301596.1 | mRNA | downstream | 9171 | 833892 ~ 838574 (-) | False | LOC113527139 |
| XM_034301679.1 | mRNA | upstream | 39182 | 887935 ~ 890302 (-) | False | LOC117596444 |
| XM_034301676.1 | mRNA | upstream | 43167 | 891920 ~ 906375 (-) | True | fam234b |
| XM_026910201.2 | mRNA | upstream | 102449 | 951202 ~ 954200 (-) | True | fmc1 |
| XM_034301448.1 | mRNA | upstream | 259940 | 1108693 ~ 1111909 (-) | True | LOC117596399 |
| XM_026910221.2 | mRNA | upstream | 266881 | 1115634 ~ 1124106 (-) | False | LOC113524091 |
| TU472265 | other | downstream | 365737 | 474566 ~ 482008 (-) | False | LOC117596396 |
| TU472228 | other | downstream | 522200 | 319734 ~ 325545 (-) | False | pick1 |
| trnar-ccu_18 | other | downstream | 537090 | 310583 ~ 310655 (-) | True | trnar-ccu_18 |
| TU472486 | other | upstream | 36949 | 885702 ~ 890280 (-) | True | LOC117596444 |
| TU472487 | other | upstream | 50775 | 899528 ~ 906361 (-) | False | fam234b |
| XR_004577594.1 | other | upstream | 58872 | 907625 ~ 907779 (-) | True | LOC117596481 |
| XR_004577595.1 | other | upstream | 61316 | 910069 ~ 910223 (-) | True | LOC117596482 |
| XR_003403678.1 | other | upstream | 65445 | 914198 ~ 914352 (-) | True | LOC113536357 |
