Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472874 |
| length | 338 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC113524069 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 1462119 ~ 1516314 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472723 | lncRNA | downstream | 117814 | 1351595 ~ 1365941 (-) | True | G398549 |
| TU472717 | lncRNA | downstream | 120719 | 1346939 ~ 1363036 (-) | True | G398545 |
| TU472714 | lncRNA | downstream | 141928 | 1341193 ~ 1341827 (-) | True | G398542 |
| TU472659 | lncRNA | downstream | 157737 | 1252043 ~ 1326018 (-) | True | G398509 |
| TU472671 | lncRNA | downstream | 160025 | 1320816 ~ 1323730 (-) | True | G398516 |
| TU472915 | lncRNA | upstream | 37313 | 1553627 ~ 1554940 (-) | True | G398679 |
| TU472901 | lncRNA | upstream | 48145 | 1564459 ~ 1577378 (-) | True | G398667 |
| TU472922 | lncRNA | upstream | 50470 | 1566784 ~ 1578770 (-) | True | G398686 |
| TU472936 | lncRNA | upstream | 85922 | 1602236 ~ 1603986 (-) | True | G398697 |
| TU472969 | lncRNA | upstream | 131386 | 1647700 ~ 1665491 (-) | True | G398718 |
| XM_034301763.1 | mRNA | downstream | 21685 | 1457832 ~ 1462070 (-) | False | LOC117596459 |
| XM_034301762.1 | mRNA | downstream | 21685 | 1457832 ~ 1462070 (-) | False | LOC117596459 |
| XM_034301760.1 | mRNA | downstream | 21685 | 1457832 ~ 1462070 (-) | False | LOC117596459 |
| XM_034301759.1 | mRNA | downstream | 21685 | 1457832 ~ 1462070 (-) | False | LOC117596459 |
| XM_034301761.1 | mRNA | downstream | 21685 | 1457832 ~ 1462070 (-) | False | LOC117596459 |
| XM_034301739.1 | mRNA | upstream | 6193 | 1522507 ~ 1538673 (-) | False | LOC113524072 |
| XM_034301738.1 | mRNA | upstream | 6193 | 1522507 ~ 1538673 (-) | True | LOC113524072 |
| XM_034301643.1 | mRNA | upstream | 49481 | 1565795 ~ 1591734 (-) | True | st13 |
| XM_026910204.2 | mRNA | upstream | 123255 | 1639569 ~ 1649047 (-) | True | cbx7a |
| XM_034301521.1 | mRNA | upstream | 167284 | 1683598 ~ 1690681 (-) | True | mief1 |
| XR_004577580.1 | other | downstream | 21685 | 1461324 ~ 1462070 (-) | False | LOC117596459 |
| XR_004577579.1 | other | downstream | 21685 | 1461354 ~ 1462070 (-) | False | LOC117596459 |
| TU472657 | other | downstream | 166119 | 1276653 ~ 1317636 (-) | False | LOC117596427 |
| TU472656 | other | downstream | 201984 | 1276653 ~ 1281771 (-) | False | LOC117596427 |
| TU472483 | other | downstream | 529794 | 951206 ~ 953961 (-) | False | fmc1 |
| TU472900 | other | upstream | 52689 | 1569003 ~ 1591729 (-) | False | st13 |
| TU473233 | other | upstream | 213776 | 1730090 ~ 1864843 (-) | True | G398890 |
| TU473235 | other | upstream | 309027 | 1825341 ~ 1881058 (-) | False | G398890 |
| trnad-guc_31 | other | upstream | 731846 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473396 | other | upstream | 855982 | 2372296 ~ 2426606 (-) | True | G399028 |
