Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472992 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | G398732 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 1691472 ~ 1691916 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472987 | lncRNA | downstream | 11790 | 1677188 ~ 1679682 (-) | False | G398730 |
| TU472985 | lncRNA | downstream | 11790 | 1677333 ~ 1679682 (-) | False | G398730 |
| TU472986 | lncRNA | downstream | 11790 | 1677333 ~ 1679682 (-) | False | G398730 |
| TU472988 | lncRNA | downstream | 11790 | 1677333 ~ 1679682 (-) | True | G398730 |
| TU472989 | lncRNA | downstream | 11790 | 1677333 ~ 1679682 (-) | False | G398730 |
| TU473004 | lncRNA | upstream | 23120 | 1715036 ~ 1716463 (-) | True | G398743 |
| TU473015 | lncRNA | upstream | 34204 | 1726120 ~ 1726528 (-) | True | G398751 |
| TU473237 | lncRNA | upstream | 89642 | 1781558 ~ 1835296 (-) | False | G398890 |
| TU473238 | lncRNA | upstream | 133681 | 1825597 ~ 1835296 (-) | False | G398890 |
| TU473234 | lncRNA | upstream | 140900 | 1832816 ~ 1864843 (-) | False | G398890 |
| XM_034301521.1 | mRNA | downstream | 791 | 1683598 ~ 1690681 (-) | True | mief1 |
| XM_026910204.2 | mRNA | downstream | 42425 | 1639569 ~ 1649047 (-) | True | cbx7a |
| XM_034301643.1 | mRNA | downstream | 99738 | 1565795 ~ 1591734 (-) | True | st13 |
| XM_034301739.1 | mRNA | downstream | 152799 | 1522507 ~ 1538673 (-) | False | LOC113524072 |
| XM_034301738.1 | mRNA | downstream | 152799 | 1522507 ~ 1538673 (-) | True | LOC113524072 |
| XM_026910171.2 | mRNA | upstream | 34985 | 1726901 ~ 1729117 (-) | True | LOC113524053 |
| XM_034301781.1 | mRNA | upstream | 74788 | 1766704 ~ 1768749 (-) | True | LOC113524064 |
| XM_034301455.1 | mRNA | upstream | 116606 | 1808522 ~ 1809853 (-) | True | LOC117596405 |
| XM_034301780.1 | mRNA | upstream | 129767 | 1821683 ~ 1823769 (-) | True | LOC117596466 |
| XM_026910160.2 | mRNA | upstream | 166966 | 1858882 ~ 1860957 (-) | True | LOC113524043 |
| TU472900 | other | downstream | 99743 | 1569003 ~ 1591729 (-) | False | st13 |
| XR_004577580.1 | other | downstream | 229402 | 1461324 ~ 1462070 (-) | False | LOC117596459 |
| XR_004577579.1 | other | downstream | 229402 | 1461354 ~ 1462070 (-) | False | LOC117596459 |
| TU472657 | other | downstream | 373836 | 1276653 ~ 1317636 (-) | False | LOC117596427 |
| TU472656 | other | downstream | 409701 | 1276653 ~ 1281771 (-) | False | LOC117596427 |
| TU473233 | other | upstream | 38174 | 1730090 ~ 1864843 (-) | True | G398890 |
| TU473235 | other | upstream | 133425 | 1825341 ~ 1881058 (-) | False | G398890 |
| trnad-guc_31 | other | upstream | 556244 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473396 | other | upstream | 680380 | 2372296 ~ 2426606 (-) | True | G399028 |
| TU473971 | other | upstream | 1269797 | 2961713 ~ 2964157 (-) | True | G399490 |
