Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU473430 |
| length | 245 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | mmd |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 2354909 ~ 2377631 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU473376 | lncRNA | downstream | 11572 | 2266690 ~ 2347812 (-) | True | G399016 |
| TU473427 | lncRNA | downstream | 14342 | 2343971 ~ 2345042 (-) | True | G399054 |
| TU473377 | lncRNA | downstream | 27693 | 2266690 ~ 2331691 (-) | False | G399016 |
| TU473380 | lncRNA | downstream | 91348 | 2262604 ~ 2268036 (-) | False | G399016 |
| TU473379 | lncRNA | downstream | 91348 | 2266306 ~ 2268036 (-) | False | G399016 |
| TU473502 | lncRNA | upstream | 180953 | 2546464 ~ 2547110 (-) | True | G399118 |
| TU473635 | lncRNA | upstream | 343446 | 2708957 ~ 2709168 (-) | True | G399245 |
| TU473642 | lncRNA | upstream | 357810 | 2723321 ~ 2723543 (-) | True | G399252 |
| TU473690 | lncRNA | upstream | 436902 | 2802413 ~ 2802629 (-) | True | G399300 |
| TU473706 | lncRNA | upstream | 460321 | 2825832 ~ 2826047 (-) | True | G399316 |
| XM_034301693.1 | mRNA | downstream | 347392 | 2008006 ~ 2011992 (-) | True | tmem220 |
| XM_026910199.2 | mRNA | downstream | 352107 | 2003622 ~ 2007277 (-) | True | mrps7 |
| XM_034301787.1 | mRNA | downstream | 376828 | 1979258 ~ 1982556 (-) | True | jmjd8 |
| XM_034301726.1 | mRNA | downstream | 388952 | 1962730 ~ 1970432 (-) | True | LOC117596454 |
| XM_026910059.2 | mRNA | upstream | 31905 | 2397416 ~ 2402161 (-) | True | tmem100a |
| XM_026910081.2 | mRNA | upstream | 133468 | 2498979 ~ 2507141 (-) | False | cbx2 |
| XM_026910080.2 | mRNA | upstream | 133468 | 2498979 ~ 2507140 (-) | True | cbx2 |
| XM_026910082.2 | mRNA | upstream | 133468 | 2498979 ~ 2506756 (-) | False | cbx2 |
| XM_026910075.2 | mRNA | upstream | 152280 | 2517791 ~ 2524179 (-) | True | LOC113523971 |
| trnad-guc_31 | other | downstream | 111153 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473235 | other | downstream | 478326 | 1825341 ~ 1881058 (-) | False | G398890 |
| TU473233 | other | downstream | 494541 | 1730090 ~ 1864843 (-) | True | G398890 |
| TU472900 | other | downstream | 767655 | 1569003 ~ 1591729 (-) | False | st13 |
| XR_004577579.1 | other | downstream | 897314 | 1461354 ~ 1462070 (-) | False | LOC117596459 |
| TU473396 | other | upstream | 6785 | 2372296 ~ 2426606 (-) | True | G399028 |
| TU473971 | other | upstream | 596202 | 2961713 ~ 2964157 (-) | True | G399490 |
| trnay-gua_7 | other | upstream | 803823 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473964 | other | upstream | 837779 | 3203290 ~ 3275955 (-) | False | G399489 |
| TU474032 | other | upstream | 858589 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
