Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU473690 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G399300 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 2802413 ~ 2802629 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU473642 | lncRNA | downstream | 78870 | 2723321 ~ 2723543 (-) | True | G399252 |
| TU473635 | lncRNA | downstream | 93245 | 2708957 ~ 2709168 (-) | True | G399245 |
| TU473502 | lncRNA | downstream | 255303 | 2546464 ~ 2547110 (-) | True | G399118 |
| TU473431 | lncRNA | downstream | 424782 | 2359384 ~ 2377631 (-) | False | mmd |
| TU473430 | lncRNA | downstream | 436902 | 2359384 ~ 2365511 (-) | False | mmd |
| TU473706 | lncRNA | upstream | 23203 | 2825832 ~ 2826047 (-) | True | G399316 |
| TU473718 | lncRNA | upstream | 57116 | 2859745 ~ 2860121 (-) | True | G399328 |
| TU473722 | lncRNA | upstream | 62068 | 2864697 ~ 2864936 (-) | True | G399332 |
| TU473726 | lncRNA | upstream | 72213 | 2874842 ~ 2875076 (-) | True | G399336 |
| TU473738 | lncRNA | upstream | 95979 | 2898608 ~ 2902751 (-) | True | G399348 |
| XM_026910075.2 | mRNA | downstream | 278234 | 2517791 ~ 2524179 (-) | True | LOC113523971 |
| XM_026910081.2 | mRNA | downstream | 295272 | 2498979 ~ 2507141 (-) | False | cbx2 |
| XM_026910080.2 | mRNA | downstream | 295273 | 2498979 ~ 2507140 (-) | True | cbx2 |
| XM_026910082.2 | mRNA | downstream | 295657 | 2498979 ~ 2506756 (-) | False | cbx2 |
| XM_026910059.2 | mRNA | downstream | 400252 | 2397416 ~ 2402161 (-) | True | tmem100a |
| XM_034301609.1 | mRNA | upstream | 111405 | 2914034 ~ 3079229 (-) | True | LOC113523961 |
| XM_034301457.1 | mRNA | upstream | 276605 | 3079234 ~ 3112252 (-) | True | si:ch211-108d22.2 |
| XM_034301633.1 | mRNA | upstream | 315706 | 3118335 ~ 3295290 (-) | False | LOC113525116 |
| XM_034301635.1 | mRNA | upstream | 315706 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| XM_034301634.1 | mRNA | upstream | 315706 | 3118335 ~ 3137575 (-) | False | LOC113525116 |
| TU473396 | other | downstream | 375807 | 2372296 ~ 2426606 (-) | True | G399028 |
| trnad-guc_31 | other | downstream | 554182 | 2248160 ~ 2248231 (-) | True | trnad-guc_31 |
| TU473235 | other | downstream | 921355 | 1825341 ~ 1881058 (-) | False | G398890 |
| TU473233 | other | downstream | 937570 | 1730090 ~ 1864843 (-) | True | G398890 |
| TU472900 | other | downstream | 1210684 | 1569003 ~ 1591729 (-) | False | st13 |
| TU473971 | other | upstream | 159084 | 2961713 ~ 2964157 (-) | True | G399490 |
| trnay-gua_7 | other | upstream | 366705 | 3169334 ~ 3169421 (-) | True | trnay-gua_7 |
| TU473964 | other | upstream | 400661 | 3203290 ~ 3275955 (-) | False | G399489 |
| TU474032 | other | upstream | 421471 | 3224100 ~ 3234301 (-) | False | LOC113525126 |
| TU473965 | other | upstream | 462084 | 3264713 ~ 3275955 (-) | False | G399489 |
